Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CLTCL1P53675 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CLTCL1P53675 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 RNU1-14P-201ENST00000362759 152 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 RNA5SP307-201ENST00000362863 116 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 RNU1-83P-201ENST00000363426 164 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 AL592291.1-201ENST00000403830 352 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.3□□□□□ -1.4
CLTCL1P53675 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.3□□□□□ -1.4
CLTCL1P53675 RPL21P89-201ENST00000444021 467 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 TPT1P3-201ENST00000492841 512 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 AC020593.1-201ENST00000507399 299 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.3□□□□□ -1.4
CLTCL1P53675 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.3□□□□□ -1.4
CLTCL1P53675 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.3□□□□□ -1.4
CLTCL1P53675 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 AC023043.4-201ENST00000612081 449 ntBASIC6.3□□□□□ -1.4
CLTCL1P53675 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CLTCL1P53675 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.3□□□□□ -1.4
CLTCL1P53675 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CLTCL1P53675 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CLTCL1P53675 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLTCL1P53675 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.3□□□□□ -1.4
CLTCL1P53675 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.3□□□□□ -1.4
CLTCL1P53675 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLTCL1P53675 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLTCL1P53675 RNA5SP283-201ENST00000365604 119 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 AL445189.1-201ENST00000405722 338 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTCL1P53675 RPS26P4-201ENST00000431743 355 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.29□□□□□ -1.4
CLTCL1P53675 MRPL48P1-201ENST00000445390 636 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 AC044797.1-201ENST00000445744 679 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.29□□□□□ -1.4
CLTCL1P53675 AC108064.1-201ENST00000513791 460 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 AC009852.2-201ENST00000567898 485 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 AC091178.1-203ENST00000584586 279 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 MIR8059-201ENST00000620427 81 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 IQCB2P-201ENST00000401788 1633 ntBASIC6.29□□□□□ -1.4
CLTCL1P53675 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CLTCL1P53675 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CLTCL1P53675 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CLTCL1P53675 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTCL1P53675 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.29□□□□□ -1.4
CLTCL1P53675 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLTCL1P53675 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLTCL1P53675 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLTCL1P53675 RNU1-64P-201ENST00000365443 163 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTCL1P53675 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTCL1P53675 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.28□□□□□ -1.4
CLTCL1P53675 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTCL1P53675 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.28□□□□□ -1.4
CLTCL1P53675 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTCL1P53675 AL160290.3-201ENST00000604869 165 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 Z98200.1-201ENST00000607298 470 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AC234782.5-201ENST00000617723 324 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTCL1P53675 AL022393.1-201ENST00000625142 1677 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AP005435.3-201ENST00000531260 3198 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.28□□□□□ -1.4
CLTCL1P53675 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
CLTCL1P53675 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CLTCL1P53675 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTCL1P53675 MIR921-201ENST00000401133 56 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AMZ2P2-201ENST00000406819 1057 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 RNA5SP36-201ENST00000410197 133 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTCL1P53675 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.28□□□□□ -1.4
CLTCL1P53675 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.28□□□□□ -1.4
CLTCL1P53675 AC006326.1-201ENST00000445465 787 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 DDX39BP2-208ENST00000453923 258 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 RPS4XP18-201ENST00000495480 763 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTCL1P53675 RNA5SP303-201ENST00000516192 130 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 OR5BC1P-201ENST00000529327 739 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.28□□□□□ -1.4
CLTCL1P53675 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.28□□□□□ -1.4
CLTCL1P53675 AC022916.3-201ENST00000592961 742 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 FAM27D1-201ENST00000612308 341 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 AC007546.2-201ENST00000623996 360 ntBASIC6.28□□□□□ -1.4
CLTCL1P53675 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTCL1P53675 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CLTCL1P53675 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CLTCL1P53675 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLTCL1P53675 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CLTCL1P53675 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLTCL1P53675 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.27□□□□□ -1.41
CLTCL1P53675 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 TCP11X1-202ENST00000622971 1372 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms