Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 HSPA8P18-201ENST00000439846 1928 ntBASIC4.19□□□□□ -1.74
CX3CR1P49238 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.19□□□□□ -1.74
CX3CR1P49238 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CR1P49238 TLK1P1-201ENST00000456760 2440 ntBASIC4.19□□□□□ -1.74
CX3CR1P49238 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CR1P49238 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 MAPK10-303ENST00000641324 3959 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CR1P49238 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC011155.1-201ENST00000316512 456 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 SNORA51.1-201ENST00000363243 140 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 MIR765-201ENST00000390226 114 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AL080315.1-201ENST00000406055 466 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CR1P49238 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CR1P49238 RPL6P29-201ENST00000414863 865 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 CHEK2P3-201ENST00000416118 248 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 GTF3AP1-201ENST00000416942 1004 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 CYCSP10-201ENST00000417973 294 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CR1P49238 MYO5BP2-201ENST00000449815 1277 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 snoU13.20-201ENST00000459180 104 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 STMN1P2-201ENST00000508435 439 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 RN7SL176P-201ENST00000580352 264 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC020910.3-201ENST00000603701 874 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC234782.5-201ENST00000617723 324 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 MIR6729-201ENST00000618194 65 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 CR381572.2-201ENST00000624852 397 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CR1P49238 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CR1P49238 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 OR51C1P-202ENST00000641159 1444 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CX3CR1P49238 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AC108751.5-201ENST00000492880 1336 ntBASIC4.18□□□□□ -1.74
CX3CR1P49238 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CR1P49238 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.18□□□□□ -1.74
CX3CR1P49238 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CR1P49238 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.17□□□□□ -1.74
CX3CR1P49238 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CR1P49238 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CX3CR1P49238 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 RN7SKP104-201ENST00000362605 328 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 RN7SKP95-201ENST00000362860 303 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 RNU1-83P-201ENST00000363426 164 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 RNU6-225P-201ENST00000384613 103 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 RNA5SP372-201ENST00000390836 115 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 CHMP1B2P-201ENST00000399581 597 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 RN7SKP213-201ENST00000410746 298 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AC114755.2-201ENST00000413520 361 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 LINC00993-201ENST00000420453 540 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.17□□□□□ -1.74
CX3CR1P49238 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CR1P49238 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC112498.1-201ENST00000444401 332 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC104629.2-201ENST00000468627 598 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 RPSAP50-201ENST00000481955 852 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC117525.1-201ENST00000515228 503 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 RNU6-347P-201ENST00000516658 105 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC022882.1-201ENST00000532142 501 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AC133555.2-201ENST00000550213 292 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.17□□□□□ -1.74
CX3CR1P49238 FKBP1BP1-201ENST00000553366 325 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 MTCO2P22-201ENST00000603246 681 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AC123786.2-201ENST00000603459 275 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms