Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.34□□□□□ -1.55
NEDD4P46934 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD4P46934 OR56B2P-202ENST00000641377 2453 ntBASIC5.34□□□□□ -1.55
NEDD4P46934 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD4P46934 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD4P46934 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.56
NEDD4P46934 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NEDD4P46934 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.34□□□□□ -1.56
NEDD4P46934 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
NEDD4P46934 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD4P46934 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD4P46934 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 RNU1-130P-201ENST00000363930 160 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 MIR921-201ENST00000401133 56 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 AL807761.1-201ENST00000417622 171 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 RPS12P10-201ENST00000427031 377 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD4P46934 ATP5G1P3-201ENST00000463301 410 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 RN7SL346P-201ENST00000491561 294 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD4P46934 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 RN7SKP46-201ENST00000515942 234 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 MIR5096-201ENST00000583713 70 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD4P46934 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD4P46934 AC096586.2-201ENST00000610260 441 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
NEDD4P46934 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NEDD4P46934 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NEDD4P46934 AC139769.1-204ENST00000472297 1931 ntBASIC5.33□□□□□ -1.56
NEDD4P46934 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NEDD4P46934 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD4P46934 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEDD4P46934 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 MTHFD2P5-201ENST00000320415 844 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 EI24P3-201ENST00000399046 1062 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
NEDD4P46934 RPS26P2-201ENST00000440331 348 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD4P46934 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD4P46934 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD4P46934 RN7SL817P-201ENST00000480777 288 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD4P46934 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD4P46934 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 MIR4433B-201ENST00000581329 102 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 AC103792.1-201ENST00000603591 919 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 AC018690.1-201ENST00000608144 626 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 MIR6891-201ENST00000618788 93 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD4P46934 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
NEDD4P46934 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD4P46934 AC105074.1-201ENST00000623380 3095 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD4P46934 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NEDD4P46934 THAP12P8-201ENST00000447914 2115 ntBASIC5.32□□□□□ -1.56
NEDD4P46934 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD4P46934 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD4P46934 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD4P46934 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
NEDD4P46934 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD4P46934 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD4P46934 RNU1-63P-201ENST00000383902 164 ntBASIC5.31□□□□□ -1.56
NEDD4P46934 NPM1P10-201ENST00000398310 865 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms