Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.14□□□□□ -1.59
SSR1P43307 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.14□□□□□ -1.59
SSR1P43307 BRAFP1-201ENST00000445336 2703 ntBASIC5.14□□□□□ -1.59
SSR1P43307 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSR1P43307 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSR1P43307 OR13C3-201ENST00000374781 1108 ntBASIC5.14□□□□□ -1.59
SSR1P43307 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSR1P43307 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.14□□□□□ -1.59
SSR1P43307 AL357515.1-201ENST00000402967 542 ntBASIC5.14□□□□□ -1.59
SSR1P43307 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.14□□□□□ -1.59
SSR1P43307 GJA6P-201ENST00000415117 1042 ntBASIC5.14□□□□□ -1.59
SSR1P43307 MTND4LP21-201ENST00000415303 295 ntBASIC5.14□□□□□ -1.59
SSR1P43307 TBCAP2-201ENST00000416175 326 ntBASIC5.14□□□□□ -1.59
SSR1P43307 CYP4F29P-201ENST00000420685 446 ntBASIC5.14□□□□□ -1.59
SSR1P43307 ELOCP10-201ENST00000440624 327 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.14□□□□□ -1.59
SSR1P43307 AC104306.1-201ENST00000449702 371 ntBASIC5.14□□□□□ -1.59
SSR1P43307 snoU13.20-201ENST00000459180 104 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC037198.2-201ENST00000478845 733 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.14□□□□□ -1.59
SSR1P43307 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.14□□□□□ -1.59
SSR1P43307 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.14□□□□□ -1.59
SSR1P43307 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.14□□□□□ -1.59
SSR1P43307 IGLVIV-53-201ENST00000520107 367 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC022832.1-201ENST00000530718 645 ntBASIC5.14□□□□□ -1.59
SSR1P43307 RFPL1S-203ENST00000539579 330 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.14□□□□□ -1.59
SSR1P43307 AC084757.1-201ENST00000559987 490 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.14□□□□□ -1.59
SSR1P43307 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.14□□□□□ -1.59
SSR1P43307 SUMO2P15-201ENST00000604285 278 ntBASIC5.14□□□□□ -1.59
SSR1P43307 ELOCP34-201ENST00000604436 327 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC009163.6-201ENST00000612367 342 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AL645927.2-201ENST00000618350 349 ntBASIC5.14□□□□□ -1.59
SSR1P43307 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.14□□□□□ -1.59
SSR1P43307 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSR1P43307 AC233968.1-201ENST00000611212 1300 ntBASIC5.14□□□□□ -1.59
SSR1P43307 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.14□□□□□ -1.59
SSR1P43307 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSR1P43307 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSR1P43307 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SSR1P43307 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSR1P43307 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSR1P43307 AC008725.1-201ENST00000605123 2263 ntBASIC5.13□□□□□ -1.59
SSR1P43307 RNU6-1331P-201ENST00000363658 106 ntBASIC5.13□□□□□ -1.59
SSR1P43307 RNA5SP428-201ENST00000365129 132 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AL645733.1-201ENST00000402250 217 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.13□□□□□ -1.59
SSR1P43307 RGS17P1-201ENST00000423358 553 ntBASIC5.13□□□□□ -1.59
SSR1P43307 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.13□□□□□ -1.59
SSR1P43307 RHOT1P3-201ENST00000436571 331 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.13□□□□□ -1.59
SSR1P43307 AC092647.3-201ENST00000443044 633 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.13□□□□□ -1.59
SSR1P43307 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.13□□□□□ -1.59
SSR1P43307 CYCSP34-201ENST00000458172 304 ntBASIC5.13□□□□□ -1.59
SSR1P43307 PPIAP21-201ENST00000464473 501 ntBASIC5.13□□□□□ -1.59
SSR1P43307 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSR1P43307 AC116562.1-201ENST00000485355 781 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.13□□□□□ -1.59
SSR1P43307 AC146944.2-203ENST00000502493 354 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC139495.1-202ENST00000513164 354 ntBASIC5.13□□□□□ -1.59
SSR1P43307 IGLV2-28-201ENST00000520681 304 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.13□□□□□ -1.59
SSR1P43307 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.13□□□□□ -1.59
SSR1P43307 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.13□□□□□ -1.59
SSR1P43307 CBX3P5-201ENST00000552017 521 ntBASIC5.13□□□□□ -1.59
SSR1P43307 SNORA74C-1-201ENST00000580726 201 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.13□□□□□ -1.59
SSR1P43307 MIR3176-201ENST00000582210 90 ntBASIC5.13□□□□□ -1.59
SSR1P43307 MIR4691-201ENST00000583764 85 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.13□□□□□ -1.59
SSR1P43307 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.13□□□□□ -1.59
SSR1P43307 AC010680.3-201ENST00000604215 520 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC087783.2-201ENST00000605070 562 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC093799.2-201ENST00000610062 578 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AL121612.2-201ENST00000612261 482 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AL627230.1-201ENST00000613077 211 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AL591926.8-201ENST00000616876 211 ntBASIC5.13□□□□□ -1.59
SSR1P43307 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.13□□□□□ -1.59
SSR1P43307 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SSR1P43307 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSR1P43307 AC009313.2-201ENST00000417893 1941 ntBASIC5.13□□□□□ -1.59
SSR1P43307 AC009229.4-201ENST00000623854 1947 ntBASIC5.13□□□□□ -1.59
SSR1P43307 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSR1P43307 AC092079.1-201ENST00000558620 1985 ntBASIC5.13□□□□□ -1.59
SSR1P43307 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.13□□□□□ -1.59
SSR1P43307 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.12□□□□□ -1.59
SSR1P43307 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.12□□□□□ -1.59
SSR1P43307 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
SSR1P43307 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 SNORA51.1-201ENST00000363243 140 ntBASIC5.12□□□□□ -1.59
SSR1P43307 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms