Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC115989.2-201ENST00000578640 563 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.42□□□□□ -1.7
RFC3P40938 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.42□□□□□ -1.7
RFC3P40938 AC068790.4-201ENST00000602474 263 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AC007497.1-201ENST00000610421 561 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AP001005.3-201ENST00000622049 129 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 NCLP2-201ENST00000416078 1462 ntBASIC4.42□□□□□ -1.7
RFC3P40938 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 Z98755.1-201ENST00000407015 1384 ntBASIC4.41□□□□□ -1.7
RFC3P40938 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFC3P40938 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 AC104297.1-201ENST00000393779 870 ntBASIC4.41□□□□□ -1.7
RFC3P40938 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 AC013429.2-201ENST00000418798 781 ntBASIC4.41□□□□□ -1.7
RFC3P40938 E2F6P2-201ENST00000420708 748 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC245028.1-201ENST00000423259 256 ntBASIC4.41□□□□□ -1.7
RFC3P40938 FABP7P1-201ENST00000424004 391 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 NRBF2P3-201ENST00000432731 865 ntBASIC4.41□□□□□ -1.7
RFC3P40938 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 AC005154.2-201ENST00000438110 379 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AL138878.2-201ENST00000440581 1241 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 RPS17P2-201ENST00000461663 408 ntBASIC4.41□□□□□ -1.7
RFC3P40938 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 RAB9BP1-201ENST00000519581 626 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFC3P40938 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.41□□□□□ -1.7
RFC3P40938 AC209154.1-201ENST00000582156 337 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC010615.3-201ENST00000597319 394 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC234771.5-201ENST00000600161 514 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC098935.2-201ENST00000604222 466 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AL137246.1-201ENST00000607072 977 ntBASIC4.41□□□□□ -1.7
RFC3P40938 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 MIR378J-201ENST00000611988 109 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AP005212.4-201ENST00000614206 710 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 AC243960.7-201ENST00000623532 707 ntBASIC4.41□□□□□ -1.7
RFC3P40938 AP000648.2-201ENST00000624182 404 ntBASIC4.41□□□□□ -1.7
RFC3P40938 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 AC027228.2-201ENST00000567141 2154 ntBASIC4.41□□□□□ -1.7
RFC3P40938 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
RFC3P40938 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RFC3P40938 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFC3P40938 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RFC3P40938 AC068446.1-201ENST00000556425 1549 ntBASIC4.41□□□□□ -1.7
RFC3P40938 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RFC3P40938 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFC3P40938 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RFC3P40938 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.4□□□□□ -1.7
RFC3P40938 AP000542.2-201ENST00000623199 6179 ntBASIC4.4□□□□□ -1.7
RFC3P40938 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFC3P40938 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RFC3P40938 AC008758.3-201ENST00000507003 1829 ntBASIC4.4□□□□□ -1.7
RFC3P40938 TLK1P1-201ENST00000456760 2440 ntBASIC4.4□□□□□ -1.7
RFC3P40938 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RFC3P40938 AC010132.2-201ENST00000295493 1043 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AC079741.1-201ENST00000321498 212 ntBASIC4.4□□□□□ -1.71
RFC3P40938 RNU6-697P-201ENST00000363348 107 ntBASIC4.4□□□□□ -1.71
RFC3P40938 RNA5SP332-201ENST00000391063 115 ntBASIC4.4□□□□□ -1.71
RFC3P40938 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 MIR298-201ENST00000401212 88 ntBASIC4.4□□□□□ -1.71
RFC3P40938 OR6C71P-201ENST00000432580 913 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.4□□□□□ -1.71
RFC3P40938 BTF3P6-201ENST00000448054 499 ntBASIC4.4□□□□□ -1.71
RFC3P40938 MTND4LP12-201ENST00000448237 295 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AC096741.1-201ENST00000472250 846 ntBASIC4.4□□□□□ -1.71
RFC3P40938 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.4□□□□□ -1.71
RFC3P40938 AC011005.3-201ENST00000491624 395 ntBASIC4.4□□□□□ -1.71
RFC3P40938 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.4□□□□□ -1.71
RFC3P40938 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms