Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 PRELID3BP5-201ENST00000508612 460 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 RN7SKP260-201ENST00000516907 149 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 PCNPP1-201ENST00000552501 511 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC005084.1-201ENST00000605160 304 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 AL023583.1-201ENST00000607518 1143 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 AL161616.1-201ENST00000611867 286 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 AL162233.1-201ENST00000620014 944 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 AC112694.2-201ENST00000623697 768 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC13P31276 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC13P31276 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC13P31276 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 AL592182.3-201ENST00000642132 3304 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC13P31276 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 FAM3C2-201ENST00000312214 681 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 RNU4-39P-201ENST00000362455 127 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC007618.1-201ENST00000366455 732 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 GLULP6-201ENST00000399502 913 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AL078599.1-201ENST00000402075 293 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC13P31276 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 AC245028.1-201ENST00000423259 256 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 NPM1P24-201ENST00000428039 894 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC13P31276 RPL7AP61-201ENST00000443410 636 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AL513343.1-201ENST00000451818 792 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 AC063943.1-201ENST00000465434 453 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC13P31276 AL049874.2-201ENST00000492636 288 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 MRPS33P2-201ENST00000507850 322 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC13P31276 RNU6-513P-201ENST00000516104 104 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC13P31276 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC13P31276 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 AL512310.9-201ENST00000553311 948 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 AL049870.4-201ENST00000555741 486 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC13P31276 AC090515.3-201ENST00000560431 315 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC13P31276 AC234771.5-201ENST00000600161 514 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 MEMO1P5-201ENST00000604810 406 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC018695.5-201ENST00000605872 315 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC015802.5-201ENST00000607478 399 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 BNIP3P41-202ENST00000616656 861 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 AC007342.8-201ENST00000623278 678 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC079298.2-201ENST00000623885 459 ntBASIC5.28□□□□□ -1.56
HOXC13P31276 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC13P31276 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
HOXC13P31276 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC13P31276 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC13P31276 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC13P31276 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC13P31276 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 RPL32P3-201ENST00000359025 275 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms