Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 AC011416.1-201ENST00000514947 1732 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 RNU6-490P-201ENST00000362985 107 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 RNA5SP114-201ENST00000363780 113 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 RHOT1P2-201ENST00000366423 333 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
COL9A1P20849 RN7SKP268-201ENST00000411107 316 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC079355.1-201ENST00000421770 223 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 CHEK2P5-201ENST00000423877 246 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 RPS17P8-201ENST00000434525 335 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.67□□□□□ -1.18
COL9A1P20849 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC011742.2-201ENST00000443818 352 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AC002381.1-201ENST00000447049 280 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 SNORD127-201ENST00000458892 86 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 RN7SL174P-201ENST00000475578 289 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC008040.4-201ENST00000494834 768 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 RN7SKP99-201ENST00000517028 307 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AP003084.1-201ENST00000524828 742 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 OR4P1P-201ENST00000530808 1136 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AP003385.6-201ENST00000531603 374 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC068993.1-201ENST00000546724 589 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.67□□□□□ -1.18
COL9A1P20849 NPM1P42-201ENST00000560329 862 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 RN7SL199P-201ENST00000578752 281 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 RN7SL656P-201ENST00000579044 281 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 RN7SL270P-201ENST00000579643 281 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AC138761.3-201ENST00000579993 334 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 MIR3672-201ENST00000584290 82 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AC023043.2-201ENST00000589678 1026 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AL157899.1-201ENST00000604110 936 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.67□□□□□ -1.18
COL9A1P20849 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 AC092608.2-201ENST00000624427 218 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
COL9A1P20849 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL9A1P20849 AL022163.1-201ENST00000430261 1569 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.67□□□□□ -1.18
COL9A1P20849 AC068733.1-202ENST00000531479 2456 ntBASIC7.67□□□□□ -1.18
COL9A1P20849 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.66□□□□□ -1.18
COL9A1P20849 AC010615.1-201ENST00000594254 1764 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 AL590065.1-201ENST00000603371 4774 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 AC093311.1-201ENST00000506586 2021 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
COL9A1P20849 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
COL9A1P20849 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.66□□□□□ -1.18
COL9A1P20849 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL9A1P20849 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.66□□□□□ -1.18
COL9A1P20849 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.66□□□□□ -1.18
COL9A1P20849 Y_RNA.167-201ENST00000363735 109 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 RN7SKP81-201ENST00000365603 331 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.66□□□□□ -1.18
COL9A1P20849 Y_RNA.496-201ENST00000384444 101 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 NDUFS5P1-201ENST00000405668 289 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 RNA5SP155-201ENST00000411154 129 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 AC017035.1-201ENST00000411999 1115 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 EIF4EP1-201ENST00000422311 642 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC7.66□□□□□ -1.18
COL9A1P20849 AC005019.1-201ENST00000436455 431 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.66□□□□□ -1.18
COL9A1P20849 AL590664.1-201ENST00000448065 339 ntBASIC7.66□□□□□ -1.18
COL9A1P20849 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms