Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.94□□□□□ -1.3
LIG1P18858 VN1R12P-201ENST00000403778 876 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC010385.1-201ENST00000412374 256 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.94□□□□□ -1.3
LIG1P18858 CEACAMP8-201ENST00000413902 580 ntBASIC6.94□□□□□ -1.3
LIG1P18858 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 KCTD9P1-201ENST00000430462 1167 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.94□□□□□ -1.3
LIG1P18858 DEFA9P-201ENST00000433042 285 ntBASIC6.94□□□□□ -1.3
LIG1P18858 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 AC241584.1-201ENST00000438469 1241 ntBASIC6.94□□□□□ -1.3
LIG1P18858 PPIAP10-201ENST00000438675 458 ntBASIC6.94□□□□□ -1.3
LIG1P18858 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC023512.1-201ENST00000444513 499 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AL035407.2-201ENST00000454090 378 ntBASIC6.94□□□□□ -1.3
LIG1P18858 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 AP002453.1-201ENST00000492327 668 ntBASIC6.94□□□□□ -1.3
LIG1P18858 FCF1P3-201ENST00000496394 590 ntBASIC6.94□□□□□ -1.3
LIG1P18858 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
LIG1P18858 PRDX4P1-201ENST00000507189 574 ntBASIC6.94□□□□□ -1.3
LIG1P18858 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 AC109471.1-201ENST00000511631 612 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC010587.2-201ENST00000511727 448 ntBASIC6.94□□□□□ -1.3
LIG1P18858 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.94□□□□□ -1.3
LIG1P18858 PRELID3BP4-201ENST00000515476 571 ntBASIC6.94□□□□□ -1.3
LIG1P18858 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.94□□□□□ -1.3
LIG1P18858 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 AC084121.1-201ENST00000533882 835 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.94□□□□□ -1.3
LIG1P18858 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 SMIM12P1-201ENST00000603004 274 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC083899.3-201ENST00000603413 594 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC008555.7-201ENST00000605008 583 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC010857.1-201ENST00000606398 594 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC099676.1-201ENST00000608886 657 ntBASIC6.94□□□□□ -1.3
LIG1P18858 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 U4.5-201ENST00000617137 123 ntBASIC6.94□□□□□ -1.3
LIG1P18858 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 AC135068.5-201ENST00000624197 983 ntBASIC6.94□□□□□ -1.3
LIG1P18858 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC073488.6-201ENST00000632293 754 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC099654.10-201ENST00000640395 161 ntBASIC6.94□□□□□ -1.3
LIG1P18858 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 WDR95P-201ENST00000425638 1542 ntBASIC6.94□□□□□ -1.3
LIG1P18858 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LIG1P18858 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIG1P18858 AP005901.5-201ENST00000545779 1796 ntBASIC6.93□□□□□ -1.3
LIG1P18858 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LIG1P18858 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIG1P18858 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 RNU1-146P-201ENST00000364015 165 ntBASIC6.93□□□□□ -1.3
LIG1P18858 RNU6-761P-201ENST00000384148 107 ntBASIC6.93□□□□□ -1.3
LIG1P18858 MTCO3P31-201ENST00000405526 789 ntBASIC6.93□□□□□ -1.3
LIG1P18858 TPMTP3-201ENST00000411928 735 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 OR6K4P-201ENST00000423179 955 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC099782.1-201ENST00000425889 474 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 AC098614.3-201ENST00000438957 440 ntBASIC6.93□□□□□ -1.3
LIG1P18858 TRIM60P18-201ENST00000441518 828 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC093166.3-201ENST00000448785 303 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 RPS27AP2-201ENST00000457576 465 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.93□□□□□ -1.3
LIG1P18858 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.93□□□□□ -1.3
LIG1P18858 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.93□□□□□ -1.3
LIG1P18858 AC124945.1-201ENST00000485133 188 ntBASIC6.93□□□□□ -1.3
LIG1P18858 OR11I1P-201ENST00000486033 954 ntBASIC6.93□□□□□ -1.3
LIG1P18858 NCOR1P1-202ENST00000486162 291 ntBASIC6.93□□□□□ -1.3
LIG1P18858 RN7SL170P-201ENST00000487098 295 ntBASIC6.93□□□□□ -1.3
LIG1P18858 TRBV5-2-201ENST00000489095 273 ntBASIC6.93□□□□□ -1.3
LIG1P18858 UGT2A3P7-201ENST00000510485 734 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms