Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AL359265.2-201ENST00000434367 631 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AC234781.3-201ENST00000452540 973 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AC022336.1-201ENST00000475510 337 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 RN7SL346P-201ENST00000491561 294 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AC016559.2-201ENST00000510759 359 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 RN7SKP276-201ENST00000516242 268 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 OR8K4P-201ENST00000534608 872 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.34□□□□□ -1.39
SNRPA1P09661 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.34□□□□□ -1.39
SNRPA1P09661 MIR4433B-201ENST00000581329 102 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 RPP40P2-201ENST00000603596 712 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AL450336.1-201ENST00000605180 586 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AL157392.4-201ENST00000609756 345 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AC078880.5-201ENST00000617845 421 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 AL355493.4-201ENST00000618530 292 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 MIR7641-1-201ENST00000627518 61 ntBASIC6.34□□□□□ -1.39
SNRPA1P09661 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNRPA1P09661 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNRPA1P09661 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.34□□□□□ -1.39
SNRPA1P09661 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNRPA1P09661 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNRPA1P09661 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.34□□□□□ -1.4
SNRPA1P09661 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SNRPA1P09661 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
SNRPA1P09661 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 U3.32-201ENST00000408116 212 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC016397.1-201ENST00000412463 242 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC098592.2-201ENST00000413158 265 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 HIGD1AP15-201ENST00000416198 280 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.33□□□□□ -1.4
SNRPA1P09661 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.33□□□□□ -1.4
SNRPA1P09661 RPL7P33-201ENST00000444159 742 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AL591719.1-201ENST00000444669 744 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 RPS17P2-201ENST00000461663 408 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 RPL5P22-201ENST00000480199 884 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC116562.1-201ENST00000485355 781 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 RPL23AP72-201ENST00000492447 435 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC105420.1-201ENST00000504389 582 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AK4P6-201ENST00000505168 528 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC093770.1-201ENST00000511559 571 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC108043.1-201ENST00000512696 574 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 SNORA19.3-201ENST00000516165 130 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC004923.2-201ENST00000529649 369 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.33□□□□□ -1.4
SNRPA1P09661 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AL606834.3-201ENST00000602615 496 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC022022.2-201ENST00000602989 360 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AC007497.1-201ENST00000610421 561 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AL049794.2-201ENST00000616301 365 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 FRG1DP-201ENST00000635586 771 ntBASIC6.33□□□□□ -1.4
SNRPA1P09661 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
SNRPA1P09661 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.33□□□□□ -1.4
SNRPA1P09661 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNRPA1P09661 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNRPA1P09661 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SNRPA1P09661 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.32□□□□□ -1.4
SNRPA1P09661 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNRPA1P09661 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNRPA1P09661 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
SNRPA1P09661 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SNRPA1P09661 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms