Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 AL023881.1-201ENST00000621088 301 ntBASIC5.09□□□□□ -1.59
TPM1P09493 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM1P09493 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.09□□□□□ -1.59
TPM1P09493 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TPM1P09493 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.6
TPM1P09493 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM1P09493 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
TPM1P09493 RHOT1P2-201ENST00000366423 333 ntBASIC5.08□□□□□ -1.6
TPM1P09493 RPL21P91-201ENST00000429231 479 ntBASIC5.08□□□□□ -1.6
TPM1P09493 RPL7P11-201ENST00000437586 658 ntBASIC5.08□□□□□ -1.6
TPM1P09493 AL353748.1-201ENST00000440753 474 ntBASIC5.08□□□□□ -1.6
TPM1P09493 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM1P09493 AC133473.1-201ENST00000455173 299 ntBASIC5.08□□□□□ -1.6
TPM1P09493 RN7SL30P-201ENST00000488416 306 ntBASIC5.08□□□□□ -1.6
TPM1P09493 RPS6P4-201ENST00000494693 758 ntBASIC5.08□□□□□ -1.6
TPM1P09493 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.08□□□□□ -1.6
TPM1P09493 MRPS33P2-201ENST00000507850 322 ntBASIC5.08□□□□□ -1.6
TPM1P09493 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.08□□□□□ -1.6
TPM1P09493 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.08□□□□□ -1.6
TPM1P09493 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM1P09493 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.08□□□□□ -1.6
TPM1P09493 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.08□□□□□ -1.6
TPM1P09493 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM1P09493 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM1P09493 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.08□□□□□ -1.6
TPM1P09493 AC020910.3-201ENST00000603701 874 ntBASIC5.08□□□□□ -1.6
TPM1P09493 FAM27B-201ENST00000610601 213 ntBASIC5.08□□□□□ -1.6
TPM1P09493 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.08□□□□□ -1.6
TPM1P09493 AC009704.2-201ENST00000618739 483 ntBASIC5.08□□□□□ -1.6
TPM1P09493 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM1P09493 AC105074.1-201ENST00000623380 3095 ntBASIC5.08□□□□□ -1.6
TPM1P09493 AC012020.1-201ENST00000624541 1728 ntBASIC5.08□□□□□ -1.6
TPM1P09493 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM1P09493 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TPM1P09493 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TPM1P09493 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM1P09493 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM1P09493 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.07□□□□□ -1.6
TPM1P09493 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM1P09493 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 U3.30-201ENST00000391308 210 ntBASIC5.07□□□□□ -1.6
TPM1P09493 Z98745.1-201ENST00000402553 494 ntBASIC5.07□□□□□ -1.6
TPM1P09493 NCSTNP1-201ENST00000406229 144 ntBASIC5.07□□□□□ -1.6
TPM1P09493 FCF1P5-201ENST00000406490 482 ntBASIC5.07□□□□□ -1.6
TPM1P09493 EIF4A1P3-201ENST00000411521 244 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AL591848.1-201ENST00000413092 322 ntBASIC5.07□□□□□ -1.6
TPM1P09493 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TPM1P09493 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM1P09493 GAPDHP49-201ENST00000421421 961 ntBASIC5.07□□□□□ -1.6
TPM1P09493 CENPIP1-201ENST00000425713 902 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM1P09493 AL035551.1-201ENST00000446931 348 ntBASIC5.07□□□□□ -1.6
TPM1P09493 H2AFZP5-201ENST00000446960 382 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC243772.1-201ENST00000451620 410 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AURKAPS1-201ENST00000451805 1212 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.07□□□□□ -1.6
TPM1P09493 AC079168.2-201ENST00000453977 416 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC079841.1-201ENST00000481228 950 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AK4P6-201ENST00000505168 528 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM1P09493 AC015795.1-201ENST00000513669 327 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM1P09493 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM1P09493 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM1P09493 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM1P09493 AC008638.3-201ENST00000603341 463 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC016252.1-201ENST00000609721 474 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM1P09493 AC026124.2-201ENST00000621847 656 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC091905.2-201ENST00000623143 306 ntBASIC5.07□□□□□ -1.6
TPM1P09493 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM1P09493 AL356121.2-201ENST00000624715 780 ntBASIC5.07□□□□□ -1.6
TPM1P09493 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM1P09493 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM1P09493 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM1P09493 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM1P09493 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TPM1P09493 MT-RNR1-201ENST00000389680 954 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM1P09493 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM1P09493 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM1P09493 SKP1P3-201ENST00000429280 487 ntBASIC5.06□□□□□ -1.6
TPM1P09493 BX119904.1-201ENST00000432026 348 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms