Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL1P09341 AC007204.2-201ENST00000615022 616 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AC127024.6-201ENST00000621598 424 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.52□□□□□ -1.85
CXCL1P09341 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CXCL1P09341 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 AL136164.3-201ENST00000624429 3978 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 HSPA8P17-201ENST00000427029 1382 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AC093311.1-201ENST00000506586 2021 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL1P09341 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL1P09341 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL1P09341 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 RNA5SP510-201ENST00000364697 99 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL1P09341 VN1R12P-201ENST00000403778 876 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AL078604.1-201ENST00000404609 466 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CXCL1P09341 AMD1P2-201ENST00000412936 992 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 RPL7L1P9-201ENST00000431298 745 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 RPS29P14-201ENST00000431518 171 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL1P09341 AC026348.1-201ENST00000462549 1053 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CXCL1P09341 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.51□□□□□ -1.85
CXCL1P09341 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.51□□□□□ -1.85
CXCL1P09341 SULT1C2P2-201ENST00000562517 294 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.51□□□□□ -1.85
CXCL1P09341 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL1P09341 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL1P09341 AC091905.2-201ENST00000623143 306 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AC015908.5-201ENST00000623289 343 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.51□□□□□ -1.85
CXCL1P09341 CASC19-264ENST00000641912 1184 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CXCL1P09341 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 THAP12P4-201ENST00000528321 2266 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 AC011493.1-201ENST00000596753 1632 ntBASIC3.51□□□□□ -1.85
CXCL1P09341 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL1P09341 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL1P09341 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL1P09341 AC006971.1-201ENST00000407916 4486 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 AL031119.1-201ENST00000404707 1879 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.5□□□□□ -1.85
CXCL1P09341 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 FAM3C2-201ENST00000312214 681 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 U3.2-201ENST00000362981 210 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 RNA5SP428-201ENST00000365129 132 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CXCL1P09341 RNU6-178P-201ENST00000384631 104 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 DUTP5-201ENST00000406790 469 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 AC115283.1-201ENST00000427353 400 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 CDY14P-201ENST00000431260 1014 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 CFL1P1-202ENST00000432948 411 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL1P09341 NPM1P48-201ENST00000436002 853 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AF228730.2-201ENST00000438784 848 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AL138899.2-201ENST00000439139 499 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 CDY12P-201ENST00000440679 1015 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 CDY13P-201ENST00000445813 1015 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 RPL31P15-201ENST00000449770 338 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 CDY23P-201ENST00000451661 1014 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL1P09341 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CXCL1P09341 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL1P09341 HMGN2P25-201ENST00000486956 268 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 RN7SL184P-201ENST00000488308 297 ntBASIC3.5□□□□□ -1.85
CXCL1P09341 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CXCL1P09341 RN7SL649P-201ENST00000496974 275 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms