Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC079298.2-201ENST00000623885 459 ntBASIC4.87□□□□□ -1.63
APOEP02649 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.87□□□□□ -1.63
APOEP02649 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.87□□□□□ -1.63
APOEP02649 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.87□□□□□ -1.63
APOEP02649 CASC19-255ENST00000641733 1385 ntBASIC4.87□□□□□ -1.63
APOEP02649 AC012618.3-205ENST00000637896 1496 ntBASIC4.87□□□□□ -1.63
APOEP02649 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.86□□□□□ -1.63
APOEP02649 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
APOEP02649 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOEP02649 OR10J6P-201ENST00000289731 930 ntBASIC4.86□□□□□ -1.63
APOEP02649 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOEP02649 ARL4AP5-201ENST00000404372 599 ntBASIC4.86□□□□□ -1.63
APOEP02649 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOEP02649 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.86□□□□□ -1.63
APOEP02649 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.86□□□□□ -1.63
APOEP02649 ARAFP2-201ENST00000440565 559 ntBASIC4.86□□□□□ -1.63
APOEP02649 RPL36AP15-201ENST00000444514 266 ntBASIC4.86□□□□□ -1.63
APOEP02649 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.86□□□□□ -1.63
APOEP02649 AL513533.1-201ENST00000453728 415 ntBASIC4.86□□□□□ -1.63
APOEP02649 RNU7-157P-201ENST00000459600 66 ntBASIC4.86□□□□□ -1.63
APOEP02649 RPL12P20-201ENST00000475538 479 ntBASIC4.86□□□□□ -1.63
APOEP02649 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOEP02649 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.86□□□□□ -1.63
APOEP02649 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
APOEP02649 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.86□□□□□ -1.63
APOEP02649 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.86□□□□□ -1.63
APOEP02649 AP006289.1-201ENST00000538089 277 ntBASIC4.86□□□□□ -1.63
APOEP02649 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.86□□□□□ -1.63
APOEP02649 MIR6820-201ENST00000611508 62 ntBASIC4.86□□□□□ -1.63
APOEP02649 AL158196.1-201ENST00000616786 434 ntBASIC4.86□□□□□ -1.63
APOEP02649 AC234782.5-201ENST00000617723 324 ntBASIC4.86□□□□□ -1.63
APOEP02649 AL133243.3-201ENST00000617415 3004 ntBASIC4.86□□□□□ -1.63
APOEP02649 AC108467.2-201ENST00000617640 1597 ntBASIC4.86□□□□□ -1.63
APOEP02649 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOEP02649 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOEP02649 ZNF137P-201ENST00000456718 1920 ntBASIC4.85□□□□□ -1.63
APOEP02649 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
APOEP02649 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.85□□□□□ -1.63
APOEP02649 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOEP02649 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 MIR192-201ENST00000384915 110 ntBASIC4.85□□□□□ -1.63
APOEP02649 CYB5AP4-201ENST00000396692 399 ntBASIC4.85□□□□□ -1.63
APOEP02649 AL080315.1-201ENST00000406055 466 ntBASIC4.85□□□□□ -1.63
APOEP02649 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.85□□□□□ -1.63
APOEP02649 AC119751.6-201ENST00000416712 186 ntBASIC4.85□□□□□ -1.63
APOEP02649 RPL7P57-201ENST00000423238 740 ntBASIC4.85□□□□□ -1.63
APOEP02649 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.85□□□□□ -1.63
APOEP02649 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.85□□□□□ -1.63
APOEP02649 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.85□□□□□ -1.63
APOEP02649 RPL7AP28-201ENST00000464513 571 ntBASIC4.85□□□□□ -1.63
APOEP02649 RPL36AP41-201ENST00000493820 306 ntBASIC4.85□□□□□ -1.63
APOEP02649 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 AC098799.3-201ENST00000506095 438 ntBASIC4.85□□□□□ -1.63
APOEP02649 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.85□□□□□ -1.63
APOEP02649 OR5M2P-201ENST00000529003 936 ntBASIC4.85□□□□□ -1.63
APOEP02649 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 AC137768.1-201ENST00000549998 553 ntBASIC4.85□□□□□ -1.63
APOEP02649 MIR4700-201ENST00000578311 74 ntBASIC4.85□□□□□ -1.63
APOEP02649 RN7SL176P-201ENST00000580352 264 ntBASIC4.85□□□□□ -1.63
APOEP02649 RN7SL690P-201ENST00000582087 240 ntBASIC4.85□□□□□ -1.63
APOEP02649 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 AC096553.1-201ENST00000605169 829 ntBASIC4.85□□□□□ -1.63
APOEP02649 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.85□□□□□ -1.63
APOEP02649 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 U3.53-201ENST00000628922 216 ntBASIC4.85□□□□□ -1.63
APOEP02649 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOEP02649 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.85□□□□□ -1.63
APOEP02649 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
APOEP02649 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOEP02649 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.85□□□□□ -1.63
APOEP02649 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOEP02649 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
APOEP02649 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOEP02649 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOEP02649 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.63
APOEP02649 AL031119.1-201ENST00000404707 1879 ntBASIC4.84□□□□□ -1.63
APOEP02649 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.84□□□□□ -1.63
APOEP02649 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOEP02649 AC079741.1-201ENST00000321498 212 ntBASIC4.84□□□□□ -1.63
APOEP02649 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.84□□□□□ -1.63
APOEP02649 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.84□□□□□ -1.63
APOEP02649 AL138878.2-201ENST00000440581 1241 ntBASIC4.84□□□□□ -1.63
APOEP02649 AC104651.2-201ENST00000447549 528 ntBASIC4.84□□□□□ -1.63
APOEP02649 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.84□□□□□ -1.63
APOEP02649 RN7SL354P-201ENST00000469282 294 ntBASIC4.84□□□□□ -1.63
APOEP02649 AC104763.1-201ENST00000475274 360 ntBASIC4.84□□□□□ -1.63
APOEP02649 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.84□□□□□ -1.63
APOEP02649 TCP11X3P-202ENST00000514289 1254 ntBASIC4.84□□□□□ -1.63
APOEP02649 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.84□□□□□ -1.63
APOEP02649 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.84□□□□□ -1.63
APOEP02649 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.84□□□□□ -1.63
APOEP02649 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.84□□□□□ -1.63
APOEP02649 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.84□□□□□ -1.63
APOEP02649 AC021106.3-201ENST00000623925 531 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms