Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AF213884.1-201ENST00000488102 463 ntBASIC5.3□□□□□ -1.56
COL4A1P02462 AC104164.2-201ENST00000496953 495 ntBASIC5.3□□□□□ -1.56
COL4A1P02462 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.3□□□□□ -1.56
COL4A1P02462 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A1P02462 CCDC58P3-201ENST00000590792 430 ntBASIC5.3□□□□□ -1.56
COL4A1P02462 FAM27D1-201ENST00000612308 341 ntBASIC5.3□□□□□ -1.56
COL4A1P02462 AL031658.2-201ENST00000616850 651 ntBASIC5.3□□□□□ -1.56
COL4A1P02462 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL4A1P02462 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.3□□□□□ -1.56
COL4A1P02462 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.3□□□□□ -1.56
COL4A1P02462 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL4A1P02462 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL4A1P02462 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A1P02462 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL4A1P02462 FCF1P5-201ENST00000406490 482 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 RPS3AP25-201ENST00000411660 793 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 TPT1P2-201ENST00000413105 503 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A1P02462 MRPS21P3-201ENST00000436696 262 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A1P02462 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A1P02462 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A1P02462 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A1P02462 RNA5SP246-201ENST00000458909 119 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 AC108751.2-201ENST00000469993 231 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 AC069304.1-201ENST00000491593 704 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 HMGB3P16-201ENST00000508037 287 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 AC099522.1-202ENST00000514718 367 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.29□□□□□ -1.56
COL4A1P02462 AC091178.1-203ENST00000584586 279 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.29□□□□□ -1.56
COL4A1P02462 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A1P02462 MIR6875-201ENST00000617506 72 ntBASIC5.29□□□□□ -1.56
COL4A1P02462 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A1P02462 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A1P02462 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL4A1P02462 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A1P02462 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL4A1P02462 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 OR56B2P-201ENST00000317102 954 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL4A1P02462 RNU11-4P-201ENST00000391149 133 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 CYP4F29P-201ENST00000420685 446 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 AL445584.1-201ENST00000431451 330 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.28□□□□□ -1.56
COL4A1P02462 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 AP002812.1-201ENST00000495378 474 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A1P02462 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A1P02462 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
COL4A1P02462 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 CASC19-204ENST00000641001 2055 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 CEACAMP8-201ENST00000413902 580 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A1P02462 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL4A1P02462 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A1P02462 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A1P02462 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A1P02462 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.28□□□□□ -1.56
COL4A1P02462 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A1P02462 AC234782.5-201ENST00000617723 324 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 AC008785.1-201ENST00000624475 456 ntBASIC5.28□□□□□ -1.56
COL4A1P02462 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
COL4A1P02462 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A1P02462 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 MFSD8-242ENST00000641690 4199 ntBASIC5.27□□□□□ -1.57
COL4A1P02462 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A1P02462 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A1P02462 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A1P02462 AL133243.3-201ENST00000617415 3004 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms