Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LDLRP01130 PANDAR-201ENST00000629595 1506 ntBASIC4.97□□□□□ -1.61
LDLRP01130 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LDLRP01130 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.96□□□□□ -1.61
LDLRP01130 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LDLRP01130 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.96□□□□□ -1.61
LDLRP01130 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
LDLRP01130 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.96□□□□□ -1.62
LDLRP01130 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
LDLRP01130 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LDLRP01130 RNU6-792P-201ENST00000363490 107 ntBASIC4.96□□□□□ -1.62
LDLRP01130 RN7SKP6-201ENST00000364795 319 ntBASIC4.96□□□□□ -1.62
LDLRP01130 RNU1-43P-201ENST00000365052 165 ntBASIC4.96□□□□□ -1.62
LDLRP01130 RNA5SP223-201ENST00000365174 120 ntBASIC4.96□□□□□ -1.62
LDLRP01130 RNU6-31P-201ENST00000384388 108 ntBASIC4.96□□□□□ -1.62
LDLRP01130 MIR589-201ENST00000385238 99 ntBASIC4.96□□□□□ -1.62
LDLRP01130 U3.36-201ENST00000408418 213 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
LDLRP01130 AC245028.1-201ENST00000423259 256 ntBASIC4.96□□□□□ -1.62
LDLRP01130 MTCO2P1-201ENST00000424648 477 ntBASIC4.96□□□□□ -1.62
LDLRP01130 UBE2D3P3-201ENST00000426992 425 ntBASIC4.96□□□□□ -1.62
LDLRP01130 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.96□□□□□ -1.62
LDLRP01130 FAM96AP1-201ENST00000430879 482 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC091390.1-201ENST00000433904 331 ntBASIC4.96□□□□□ -1.62
LDLRP01130 OR6D1P-201ENST00000436165 939 ntBASIC4.96□□□□□ -1.62
LDLRP01130 RPL35AP21-201ENST00000437667 333 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC073648.4-201ENST00000442655 781 ntBASIC4.96□□□□□ -1.62
LDLRP01130 MTCYBP21-201ENST00000443300 1113 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 AL589765.3-201ENST00000446084 462 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.96□□□□□ -1.62
LDLRP01130 NOP56P2-201ENST00000447491 769 ntBASIC4.96□□□□□ -1.62
LDLRP01130 NPM1P39-201ENST00000449818 867 ntBASIC4.96□□□□□ -1.62
LDLRP01130 BX842559.2-201ENST00000451418 605 ntBASIC4.96□□□□□ -1.62
LDLRP01130 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 SUMO1P1-201ENST00000497904 306 ntBASIC4.96□□□□□ -1.62
LDLRP01130 MTCO2P9-201ENST00000503214 694 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC114322.1-201ENST00000506771 926 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 MTND6P2-201ENST00000512226 524 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 AC105031.1-201ENST00000518550 476 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC013701.1-201ENST00000522657 465 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LDLRP01130 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.96□□□□□ -1.62
LDLRP01130 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.96□□□□□ -1.62
LDLRP01130 SNORD39.2-201ENST00000579995 76 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.96□□□□□ -1.62
LDLRP01130 SNX6P1-201ENST00000601728 1224 ntBASIC4.96□□□□□ -1.62
LDLRP01130 ABI1P1-201ENST00000603375 1120 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC011626.1-201ENST00000604710 562 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC018754.1-201ENST00000607486 925 ntBASIC4.96□□□□□ -1.62
LDLRP01130 AC095038.2-201ENST00000621464 1070 ntBASIC4.96□□□□□ -1.62
LDLRP01130 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.96□□□□□ -1.62
LDLRP01130 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LDLRP01130 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LDLRP01130 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LDLRP01130 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LDLRP01130 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LDLRP01130 AL359715.4-201ENST00000606629 1436 ntBASIC4.96□□□□□ -1.62
LDLRP01130 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LDLRP01130 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.96□□□□□ -1.62
LDLRP01130 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 CASC19-281ENST00000642118 1554 ntBASIC4.95□□□□□ -1.62
LDLRP01130 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 RNU4-4P-201ENST00000364588 130 ntBASIC4.95□□□□□ -1.62
LDLRP01130 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LDLRP01130 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LDLRP01130 AC013442.1-201ENST00000397347 228 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AL034403.1-201ENST00000399414 885 ntBASIC4.95□□□□□ -1.62
LDLRP01130 HMGB3P7-201ENST00000400214 611 ntBASIC4.95□□□□□ -1.62
LDLRP01130 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 ATP5F1P6-201ENST00000402768 767 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AL359643.1-201ENST00000404109 423 ntBASIC4.95□□□□□ -1.62
LDLRP01130 DUTP5-201ENST00000406790 469 ntBASIC4.95□□□□□ -1.62
LDLRP01130 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.95□□□□□ -1.62
LDLRP01130 MIR1271-201ENST00000408537 86 ntBASIC4.95□□□□□ -1.62
LDLRP01130 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.95□□□□□ -1.62
LDLRP01130 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 MTND4P11-201ENST00000417020 1058 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AC093084.1-201ENST00000424233 687 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AL360081.1-201ENST00000428299 555 ntBASIC4.95□□□□□ -1.62
LDLRP01130 RBMY2QP-201ENST00000429799 1147 ntBASIC4.95□□□□□ -1.62
LDLRP01130 MTCYBP15-201ENST00000433123 1127 ntBASIC4.95□□□□□ -1.62
LDLRP01130 HMGB3P10-201ENST00000434734 572 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms