Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC090527.3-201ENST00000619041 548 ntBASIC3.94□□□□□ -1.78
UPK1BO75841 AC111152.1-202ENST00000635848 339 ntBASIC3.94□□□□□ -1.78
UPK1BO75841 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.94□□□□□ -1.78
UPK1BO75841 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPK1BO75841 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
UPK1BO75841 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
UPK1BO75841 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UPK1BO75841 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
UPK1BO75841 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
UPK1BO75841 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UPK1BO75841 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1BO75841 SNORA74C-2-201ENST00000411179 201 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 NFU1P1-201ENST00000413128 774 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.93□□□□□ -1.78
UPK1BO75841 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1BO75841 CYP4F29P-201ENST00000420685 446 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 RAD23BP1-201ENST00000421404 1227 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.93□□□□□ -1.78
UPK1BO75841 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 TPTE2P3-201ENST00000441562 1189 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 AL606490.1-201ENST00000452266 765 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 DDX39BP2-208ENST00000453923 258 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 RNA5SP228-201ENST00000516232 133 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 AC027369.2-201ENST00000528030 440 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1BO75841 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1BO75841 OR11J2P-201ENST00000555298 907 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.93□□□□□ -1.78
UPK1BO75841 FAM60CP-201ENST00000591086 664 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 AC117490.2-201ENST00000610042 594 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.93□□□□□ -1.78
UPK1BO75841 AC007546.2-201ENST00000623996 360 ntBASIC3.93□□□□□ -1.78
UPK1BO75841 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1BO75841 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.93□□□□□ -1.78
UPK1BO75841 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
UPK1BO75841 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.93□□□□□ -1.78
UPK1BO75841 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPK1BO75841 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC011493.1-201ENST00000596753 1632 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 RNA5SP122-201ENST00000384457 108 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 MT-TP-201ENST00000387461 68 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
UPK1BO75841 AL390774.1-201ENST00000411924 246 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 OR51B3P-201ENST00000412287 913 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AL356535.1-201ENST00000440335 398 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1BO75841 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC122714.1-201ENST00000502510 459 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC098799.3-201ENST00000506095 438 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AC093325.1-201ENST00000508378 326 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1BO75841 RNA5SP43-201ENST00000516559 110 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC008147.3-201ENST00000548666 354 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 RN7SL802P-201ENST00000577858 299 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 MIR5699-201ENST00000578903 90 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC073137.1-201ENST00000605636 634 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AC138473.1-201ENST00000605717 526 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AC010245.2-201ENST00000606908 1167 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AC007620.3-201ENST00000608131 497 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 MIR486-1-201ENST00000612171 68 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 AC135352.1-201ENST00000506173 1418 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1BO75841 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1BO75841 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
UPK1BO75841 AL391684.1-202ENST00000641293 1636 ntBASIC3.92□□□□□ -1.78
UPK1BO75841 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.91□□□□□ -1.78
UPK1BO75841 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
UPK1BO75841 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
UPK1BO75841 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms