Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CUX2O14529 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.9□□□□□ -1.14
CUX2O14529 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUX2O14529 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUX2O14529 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUX2O14529 AC007068.1-201ENST00000396690 844 ntBASIC7.9□□□□□ -1.14
CUX2O14529 NPM1P36-201ENST00000415681 835 ntBASIC7.9□□□□□ -1.14
CUX2O14529 AC104978.1-201ENST00000449387 391 ntBASIC7.9□□□□□ -1.14
CUX2O14529 PPIAP15-201ENST00000479662 484 ntBASIC7.9□□□□□ -1.14
CUX2O14529 RN7SL558P-201ENST00000497468 299 ntBASIC7.9□□□□□ -1.14
CUX2O14529 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC7.9□□□□□ -1.14
CUX2O14529 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUX2O14529 PAICSP4-201ENST00000517543 1253 ntBASIC7.9□□□□□ -1.14
CUX2O14529 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.9□□□□□ -1.14
CUX2O14529 NPM1P5-201ENST00000557228 838 ntBASIC7.9□□□□□ -1.14
CUX2O14529 AC093249.4-201ENST00000564755 259 ntBASIC7.9□□□□□ -1.14
CUX2O14529 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.9□□□□□ -1.14
CUX2O14529 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC7.9□□□□□ -1.14
CUX2O14529 AC090912.3-201ENST00000609775 533 ntBASIC7.9□□□□□ -1.14
CUX2O14529 AC026367.3-201ENST00000619032 590 ntBASIC7.9□□□□□ -1.14
CUX2O14529 AP001002.2-201ENST00000625137 386 ntBASIC7.9□□□□□ -1.14
CUX2O14529 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CUX2O14529 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.9□□□□□ -1.15
CUX2O14529 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.9□□□□□ -1.15
CUX2O14529 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.89□□□□□ -1.15
CUX2O14529 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUX2O14529 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CUX2O14529 SDHCP2-201ENST00000398565 501 ntBASIC7.89□□□□□ -1.15
CUX2O14529 CYCSP32-201ENST00000440548 321 ntBASIC7.89□□□□□ -1.15
CUX2O14529 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.89□□□□□ -1.15
CUX2O14529 H2AFZP5-201ENST00000446960 382 ntBASIC7.89□□□□□ -1.15
CUX2O14529 AC022336.1-201ENST00000475510 337 ntBASIC7.89□□□□□ -1.15
CUX2O14529 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.89□□□□□ -1.15
CUX2O14529 ENPP7P11-201ENST00000505915 627 ntBASIC7.89□□□□□ -1.15
CUX2O14529 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUX2O14529 PRPF19P1-201ENST00000584766 898 ntBASIC7.89□□□□□ -1.15
CUX2O14529 AL391261.4-201ENST00000616012 481 ntBASIC7.89□□□□□ -1.15
CUX2O14529 AC243960.7-201ENST00000623532 707 ntBASIC7.89□□□□□ -1.15
CUX2O14529 AC011815.3-201ENST00000624194 473 ntBASIC7.89□□□□□ -1.15
CUX2O14529 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUX2O14529 TTC41P-205ENST00000551270 3963 ntBASIC7.89□□□□□ -1.15
CUX2O14529 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CUX2O14529 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUX2O14529 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUX2O14529 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.89□□□□□ -1.15
CUX2O14529 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUX2O14529 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.88□□□□□ -1.15
CUX2O14529 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
CUX2O14529 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CUX2O14529 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
CUX2O14529 RN7SKP33-201ENST00000410942 340 ntBASIC7.88□□□□□ -1.15
CUX2O14529 AC068533.1-201ENST00000418542 415 ntBASIC7.88□□□□□ -1.15
CUX2O14529 AC009506.2-201ENST00000420635 840 ntBASIC7.88□□□□□ -1.15
CUX2O14529 AC104763.1-201ENST00000475274 360 ntBASIC7.88□□□□□ -1.15
CUX2O14529 AC006499.5-201ENST00000505037 514 ntBASIC7.88□□□□□ -1.15
CUX2O14529 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.88□□□□□ -1.15
CUX2O14529 RNU4-89P-201ENST00000607443 133 ntBASIC7.88□□□□□ -1.15
CUX2O14529 AL121772.2-201ENST00000614331 297 ntBASIC7.88□□□□□ -1.15
CUX2O14529 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.88□□□□□ -1.15
CUX2O14529 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CUX2O14529 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.88□□□□□ -1.15
CUX2O14529 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CUX2O14529 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUX2O14529 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CUX2O14529 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.87□□□□□ -1.15
CUX2O14529 AC079809.1-201ENST00000415468 276 ntBASIC7.87□□□□□ -1.15
CUX2O14529 E2F6P2-201ENST00000420708 748 ntBASIC7.87□□□□□ -1.15
CUX2O14529 RPL7P9-201ENST00000468715 747 ntBASIC7.87□□□□□ -1.15
CUX2O14529 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.87□□□□□ -1.15
CUX2O14529 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.87□□□□□ -1.15
CUX2O14529 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CUX2O14529 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CUX2O14529 SCARNA15-201ENST00000607520 4325 ntBASIC7.87□□□□□ -1.15
CUX2O14529 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.87□□□□□ -1.15
CUX2O14529 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CUX2O14529 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.87□□□□□ -1.15
CUX2O14529 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.87□□□□□ -1.15
CUX2O14529 AC104260.2-201ENST00000623551 3497 ntBASIC7.87□□□□□ -1.15
CUX2O14529 RNU1-130P-201ENST00000363930 160 ntBASIC7.87□□□□□ -1.15
CUX2O14529 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CUX2O14529 QRSL1P2-201ENST00000418582 964 ntBASIC7.87□□□□□ -1.15
CUX2O14529 RPL7P33-201ENST00000444159 742 ntBASIC7.87□□□□□ -1.15
CUX2O14529 RN7SL517P-201ENST00000462240 305 ntBASIC7.87□□□□□ -1.15
CUX2O14529 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.87□□□□□ -1.15
CUX2O14529 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.87□□□□□ -1.15
CUX2O14529 AC010460.1-201ENST00000507087 466 ntBASIC7.87□□□□□ -1.15
CUX2O14529 RNU6-709P-201ENST00000517257 104 ntBASIC7.87□□□□□ -1.15
CUX2O14529 MIR5195-201ENST00000583555 115 ntBASIC7.87□□□□□ -1.15
CUX2O14529 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.87□□□□□ -1.15
CUX2O14529 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CUX2O14529 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms