Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 DBF4P1-201ENST00000412976 1892 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 DDX18P5-201ENST00000534547 1306 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 MRRFP1-201ENST00000435941 1675 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC119744.1-201ENST00000454746 1715 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 OR5H2-201ENST00000355273 945 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 TAF9BP1-201ENST00000396646 746 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 RN7SKP151-201ENST00000410230 316 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 PTCD2P2-201ENST00000415579 1095 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL513325.1-201ENST00000417716 1034 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL7P53-201ENST00000421245 739 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL354766.1-201ENST00000423396 542 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 BRWD1P3-201ENST00000428816 390 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 GAPDHP48-201ENST00000436626 961 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 FHP1-201ENST00000442741 703 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 ART2BP-201ENST00000453501 499 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL354710.1-201ENST00000453641 246 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC108734.3-201ENST00000481241 1165 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 BET1P1-201ENST00000482276 359 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC073358.1-201ENST00000505671 684 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 OR5H4P-201ENST00000510851 923 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 MRPS33P3-201ENST00000513456 322 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 snoU109.6-201ENST00000516831 118 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 RN7SKP283-201ENST00000517197 270 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 NPM1P42-201ENST00000560329 862 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC079171.1-201ENST00000568788 914 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AL390838.2-201ENST00000602394 274 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AP003973.1-201ENST00000604639 691 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 HIRAP1-201ENST00000605318 787 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC121761.2-201ENST00000617300 689 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR193BHG-214ENST00000641765 509 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC144833.1-201ENST00000567953 4089 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 AC024587.1-201ENST00000505925 2157 ntBASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA3Q9Y5H0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
PCDHGA3Q9Y5H0 AC093849.1-201ENST00000563631 2209 ntBASIC5.71□□□□□ -1.49
PCDHGA3Q9Y5H0 AC010329.2-201ENST00000595195 2737 ntBASIC5.71□□□□□ -1.49
PCDHGA3Q9Y5H0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 PDZK1P1-202ENST00000425209 1350 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 SELENOWP1-201ENST00000322792 252 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 GSTA8P-201ENST00000404253 637 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SKP17-201ENST00000411242 351 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 RAP1BP1-201ENST00000412709 553 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 MRPS36P1-201ENST00000421291 307 ntBASIC5.71□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms