Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL158152.1-201ENST00000602652 1435 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 SAMM50P1-201ENST00000455403 1399 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL390862.1-201ENST00000635467 1469 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 RPL23P2-201ENST00000320371 421 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 MIR133A2-201ENST00000347538 102 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 RNU6-796P-201ENST00000391086 107 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL445183.3-201ENST00000414168 502 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 GNG5P5-201ENST00000420444 220 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC007161.1-204ENST00000423039 460 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 CEACAMP7-201ENST00000444105 496 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL627224.1-201ENST00000448334 444 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AL672138.1-201ENST00000450604 1015 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 PTGES3P5-201ENST00000455109 434 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 RN7SL727P-201ENST00000482164 296 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 PDCL3P4-201ENST00000489621 720 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AP000916.1-201ENST00000533869 835 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC109446.2-201ENST00000567872 497 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC005341.1-201ENST00000571086 708 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 MIR7155-201ENST00000615925 56 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC013470.4-201ENST00000619978 986 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC005005.4-201ENST00000623789 16698 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC140134.1-201ENST00000511830 3544 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 AC005332.5-201ENST00000591222 2919 ntBASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CTDP1Q9Y5B0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 ZNF90P1-201ENST00000480493 1951 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RNA5SP183-201ENST00000362452 119 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RNU1-43P-201ENST00000365052 165 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 SNORA16A-201ENST00000384342 137 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RNA5SP339-201ENST00000390987 122 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL603865.2-201ENST00000401679 213 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RPL23AP27-201ENST00000415161 451 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 HMGB1P49-201ENST00000418882 569 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC108075.1-201ENST00000424692 529 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 BX119904.1-201ENST00000432026 348 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 MTCO2P3-201ENST00000442543 421 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC093752.1-206ENST00000511823 336 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 SNORA3.4-201ENST00000515969 96 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC061975.8-201ENST00000587058 721 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC119751.7-201ENST00000600494 245 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL353778.1-201ENST00000603149 408 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL158042.1-201ENST00000605338 460 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms