Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 OR51H2P-202ENST00000641424 3046 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 HSPD1P16-201ENST00000402302 394 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AL136116.2-201ENST00000404020 785 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SKP273-201ENST00000411392 314 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 GTF3AP1-201ENST00000416942 1004 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 BMS1P13-201ENST00000417301 885 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 SEC63P1-201ENST00000425785 1258 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 RHOT1P3-201ENST00000436571 331 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 SERPINA7P1-201ENST00000443077 631 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 CYCSP34-201ENST00000458172 304 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC008953.1-201ENST00000497334 318 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC073358.1-201ENST00000505671 684 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 RNA5SP34-201ENST00000516887 130 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 VTA1P2-201ENST00000520205 911 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AP005901.4-201ENST00000577336 569 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AP000919.1-201ENST00000582850 985 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC006116.3-201ENST00000592968 361 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 LINC01739-205ENST00000641890 573 ntBASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDD3Q9Y3P4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RNU1-83P-201ENST00000363426 164 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RNA5SP428-201ENST00000365129 132 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SKP269-201ENST00000365545 319 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RNU1-106P-201ENST00000384382 164 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SKP229-201ENST00000410465 302 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 GJA6P-201ENST00000415117 1042 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AF186996.5-201ENST00000418098 904 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 NMNAT1P2-201ENST00000435192 860 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AL137845.2-201ENST00000444292 988 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 TDGF1P1-201ENST00000445734 527 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC000111.2-201ENST00000448200 210 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 HMGN1P8-201ENST00000463578 288 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SL319P-201ENST00000480656 221 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC004980.4-201ENST00000513375 203 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SKP46-201ENST00000515942 234 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SKP66-201ENST00000516681 231 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 RNA5SP392-201ENST00000516905 112 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms