Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 MTCO1P25-201ENST00000414449 1799 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 RNU6-845P-201ENST00000362578 103 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 SNORD56.2-201ENST00000363242 71 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 RNU1-84P-201ENST00000365447 164 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 RNU6-877P-201ENST00000383868 107 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC007066.1-201ENST00000392902 381 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 Y_RNA.618-201ENST00000410949 107 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC017035.1-201ENST00000411999 1115 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AL663061.1-201ENST00000416625 580 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC069157.1-201ENST00000421749 137 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC007742.1-201ENST00000425789 329 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 RPSAP65-201ENST00000429660 595 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 ELOCP26-201ENST00000436067 329 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC110602.1-201ENST00000437414 318 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 GAPDHP33-201ENST00000443168 1013 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 SEPT14P24-201ENST00000447236 180 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 NDUFA5P7-201ENST00000452914 242 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC092757.1-201ENST00000467293 467 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 IGLVIV-64-201ENST00000518581 301 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 DPPA3P2-202ENST00000557188 1219 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 HMGB1P33-201ENST00000563485 527 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC022916.3-201ENST00000592961 742 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 VN1R80P-201ENST00000597126 338 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC139769.3-201ENST00000618383 175 ntBASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC104118.1-201ENST00000607625 1589 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RNU1-87P-201ENST00000363727 170 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RNU6-474P-201ENST00000384243 107 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RNU6-253P-201ENST00000384730 105 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AL359694.1-201ENST00000403247 604 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 HMGB3P18-201ENST00000406327 590 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RSU1P3-201ENST00000412878 835 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AL929472.1-201ENST00000417484 429 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RPS29P14-201ENST00000431518 171 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 PPIAP20-201ENST00000449839 135 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC011411.1-201ENST00000509592 876 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 PCMTD1P2-201ENST00000565017 355 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AL392112.1-201ENST00000605115 829 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC106028.5-201ENST00000610332 395 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 MIR4302-201ENST00000638058 60 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC011493.1-201ENST00000596753 1632 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms