Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC004948.1-201ENST00000609858 672 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL592148.2-201ENST00000612210 372 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 RNA5SP439-201ENST00000617595 124 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL035661.1-201ENST00000620459 1144 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 MIR6730-201ENST00000622213 67 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AP003072.4-201ENST00000624580 310 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 FRG1EP-201ENST00000634469 770 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC099786.3-201ENST00000565735 1410 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL355578.1-201ENST00000607405 1328 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC011933.2-201ENST00000578539 2790 ntBASIC5.21□□□□□ -1.57
LRFN1Q9P244 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LRFN1Q9P244 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
LRFN1Q9P244 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LRFN1Q9P244 AC010266.2-201ENST00000564741 3255 ntBASIC5.21□□□□□ -1.57
LRFN1Q9P244 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL451142.2-201ENST00000429076 2090 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 Y_RNA.472-201ENST00000384322 102 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 RPL23AP17-201ENST00000401064 499 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL136310.1-201ENST00000404926 654 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 RPS6P23-201ENST00000413224 722 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 NPM1P4-201ENST00000414095 812 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 RPS3AP37-201ENST00000419176 745 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 RPF2P1-201ENST00000424137 906 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 VN1R21P-201ENST00000426703 765 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC012075.1-201ENST00000436549 580 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL390119.1-201ENST00000440329 312 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 SBDSP1-204ENST00000453858 737 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 RPS3AP53-201ENST00000454716 778 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL133445.1-201ENST00000467051 452 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 GAPDHP39-201ENST00000481866 979 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC004815.1-201ENST00000484185 331 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 TOMM22P4-201ENST00000511318 336 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 EIF3KP3-201ENST00000514461 639 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC097486.1-201ENST00000515331 210 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 RNU6-311P-201ENST00000516224 102 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC023632.1-201ENST00000518463 375 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC078899.1-201ENST00000521432 1185 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 MRPS21P7-201ENST00000566937 238 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC015720.2-201ENST00000567709 334 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AL163952.1-202ENST00000569625 600 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC006115.2-201ENST00000596823 202 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 AP001267.4-201ENST00000602598 545 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC002069.2-201ENST00000603580 883 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 AC099676.1-201ENST00000608886 657 ntBASIC5.21□□□□□ -1.58
LRFN1Q9P244 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRFN1Q9P244 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LRFN1Q9P244 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 SMG1P6-201ENST00000532337 2930 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms