Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL121950.1-201ENST00000624993 2077 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 RNY4P14-201ENST00000363656 96 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 RNU6-1009P-201ENST00000390996 107 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 EI24P3-201ENST00000399046 1062 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 MTCYBP36-201ENST00000404146 440 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 SNORA11.5-201ENST00000408163 128 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 RNU6-248P-201ENST00000410720 107 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC068533.2-201ENST00000411872 306 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 USP9YP13-201ENST00000417797 480 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 OFD1P18Y-201ENST00000420889 959 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 USP9YP8-201ENST00000441913 500 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 RPL31P44-201ENST00000447680 377 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 snoU109.1-201ENST00000459339 135 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 RN7SL714P-201ENST00000487050 298 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC011352.3-201ENST00000505162 593 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC106800.3-201ENST00000511389 308 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 PTGES3P3-201ENST00000511479 482 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC084121.1-201ENST00000533882 835 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC004217.3-201ENST00000551552 878 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL121579.2-201ENST00000555466 590 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC002519.2-203ENST00000567043 837 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 SS18L2P2-201ENST00000583960 235 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC005332.4-201ENST00000592752 579 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 RPSAP75-201ENST00000605848 301 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AC064836.2-201ENST00000609491 462 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL592295.2-201ENST00000612578 206 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 AL132640.3-201ENST00000630473 177 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 CASC19-260ENST00000641828 2001 ntBASIC6.88□□□□□ -1.31
CNTN3Q9P232 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTN3Q9P232 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTN3Q9P232 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC107982.1-201ENST00000507171 1300 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 RN7SKP237-201ENST00000364663 301 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 Y_RNA.573-201ENST00000384763 105 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ARL4AP5-201ENST00000404372 599 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 RNA5SP431-201ENST00000410312 120 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 RN7SKP108-201ENST00000411367 328 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms