Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC116651.1-201ENST00000609724 556 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC078883.4-201ENST00000623218 367 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AP000550.3-201ENST00000637734 379 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VTA1Q9NP79 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
VTA1Q9NP79 AC111188.2-201ENST00000529697 1387 ntBASIC6.15□□□□□ -1.43
VTA1Q9NP79 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
VTA1Q9NP79 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VTA1Q9NP79 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
VTA1Q9NP79 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
VTA1Q9NP79 AL158152.1-201ENST00000602652 1435 ntBASIC6.15□□□□□ -1.43
VTA1Q9NP79 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
VTA1Q9NP79 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
VTA1Q9NP79 OR4F13P-202ENST00000560066 2054 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 RNU6-543P-201ENST00000362576 108 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 RNU6-353P-201ENST00000364266 108 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 MIR525-201ENST00000384978 85 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 U3.36-201ENST00000408418 213 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 RPL7P29-201ENST00000437151 728 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 SETD6P1-201ENST00000444575 317 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC091860.1-201ENST00000505723 432 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC113347.3-201ENST00000509113 148 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 SETP1-201ENST00000556014 845 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC009094.1-201ENST00000564443 426 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC005341.1-201ENST00000571086 708 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 MIR4646-201ENST00000580775 63 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 VN1R78P-201ENST00000597393 564 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC013444.2-201ENST00000603317 787 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC095055.1-201ENST00000603472 1113 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC009948.4-201ENST00000604692 675 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC009237.15-201ENST00000610252 501 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 CYP4F35P-202ENST00000636121 390 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 HSPA8P18-201ENST00000439846 1928 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
VTA1Q9NP79 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 AL137100.1-201ENST00000556703 1620 ntBASIC6.14□□□□□ -1.43
VTA1Q9NP79 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTA1Q9NP79 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 SMG1P7-201ENST00000565246 2704 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 Y_RNA.472-201ENST00000384322 102 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 MIR550A3-201ENST00000390735 95 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 AL589647.1-201ENST00000402485 466 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 MFSD13B-201ENST00000420133 1290 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 SETP9-201ENST00000423837 832 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 RIMKLBP2-201ENST00000424737 654 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 OR5AW1P-201ENST00000426334 1006 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms