Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC017079.1-201ENST00000333650 415 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 RPL23AP59-201ENST00000399415 461 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 NRBF2P2-201ENST00000413087 861 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC062016.2-201ENST00000420950 676 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 NPM1P26-201ENST00000426339 738 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 RPL12P28-201ENST00000430852 489 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 RN7SL41P-201ENST00000476144 297 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC016839.1-201ENST00000578162 867 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AC012409.3-201ENST00000611343 981 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AL121890.3-201ENST00000618494 516 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 AL672167.1-203ENST00000641299 2975 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 RNU4-39P-201ENST00000362455 127 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 RNA5SP151-201ENST00000365632 117 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL590762.2-201ENST00000395798 571 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL359643.1-201ENST00000404109 423 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 TMSB10P2-201ENST00000416049 131 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 RPL23AP43-201ENST00000446445 471 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CYCSP34-201ENST00000458172 304 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AP005119.2-201ENST00000579735 1105 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 RNF138P2-201ENST00000603490 592 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL590392.1-201ENST00000604960 446 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 OR51C1P-201ENST00000608504 942 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL445423.1-201ENST00000609941 536 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC005962.2-201ENST00000611427 652 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 ICE2P1-201ENST00000512800 1849 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AP001002.1-201ENST00000625148 1513 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 RNU1-20P-201ENST00000363314 162 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL606490.8-201ENST00000441624 319 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 RPL23AP24-201ENST00000458203 385 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC105233.3-201ENST00000531125 744 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 MIR3936-201ENST00000584304 110 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 BPIFA4P-203ENST00000603168 689 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 AL356218.2-201ENST00000605264 187 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 CPHL1P-201ENST00000461341 3407 ntBASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KIAA1549Q9HCM3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 AC120036.2-201ENST00000509729 1474 ntBASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 RNA5SP515-201ENST00000364570 118 ntBASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 RNA5SP479-201ENST00000364858 117 ntBASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 AC097374.1-203ENST00000400783 485 ntBASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 AC007064.3-201ENST00000422608 359 ntBASIC4.06□□□□□ -1.76
KIAA1549Q9HCM3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms