Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 RN7SKP95-201ENST00000362860 303 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 SNORD115-48-201ENST00000364764 76 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 RNU6-1257P-201ENST00000384625 110 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 MTCO2P21-201ENST00000419780 677 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 MTCYBP31-201ENST00000438855 1122 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 ELOCP3-201ENST00000439303 348 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 PRPF38AP1-201ENST00000451976 933 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 NDUFA5P9-201ENST00000472609 340 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 RN7SL860P-201ENST00000473738 223 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC135999.1-201ENST00000478962 479 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 IGLV2-34-201ENST00000490007 283 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC098976.1-201ENST00000513014 541 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 RNU6-1102P-201ENST00000516149 96 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 SNORA76.2-201ENST00000517095 137 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 SEC11B-201ENST00000518383 499 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 OR8A2P-201ENST00000528631 952 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC008033.2-201ENST00000542626 177 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC040958.1-201ENST00000561102 201 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AL162431.4-201ENST00000604674 411 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AC245008.1-201ENST00000608123 476 ntBASIC5.34□□□□□ -1.55
EBF3Q9H4W6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.34□□□□□ -1.56
EBF3Q9H4W6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
EBF3Q9H4W6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
EBF3Q9H4W6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
EBF3Q9H4W6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.34□□□□□ -1.56
EBF3Q9H4W6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AP005432.1-201ENST00000580891 3485 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CUL4AP1-201ENST00000514750 1863 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC136624.1-201ENST00000400791 413 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 MTCO2P31-201ENST00000402702 684 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 RN7SKP114-201ENST00000410327 279 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CHEK2P3-201ENST00000416118 248 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AL512637.2-201ENST00000431287 1256 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ZNF965P-201ENST00000432501 817 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ELOCP11-201ENST00000436690 332 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CDY12P-201ENST00000440679 1015 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 RPL34P20-201ENST00000442771 351 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ELOCP16-201ENST00000444494 332 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CDY13P-201ENST00000445813 1015 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CABYRP1-201ENST00000465493 1045 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 PCNAP1-201ENST00000505363 709 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC016559.2-201ENST00000510759 359 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 SOX5P1-201ENST00000524155 1127 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 UBTFL10-201ENST00000528532 562 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 EDDM3DP-201ENST00000554692 434 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms