Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 DDX43P2-201ENST00000604753 1354 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 ENSAP3-201ENST00000312710 333 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 TMSB4XP4-201ENST00000323496 618 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 RNA5SP326-201ENST00000363209 110 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 RNU6-666P-201ENST00000363499 107 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 MIR130A-201ENST00000385274 89 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 U3.28-201ENST00000391249 210 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC005042.1-201ENST00000393397 800 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 RPS27AP11-201ENST00000402798 447 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 SETP15-201ENST00000412724 337 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC027644.1-201ENST00000419595 298 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AL035407.1-201ENST00000429211 571 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 MTND1P32-201ENST00000433043 938 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 HMGB1P48-201ENST00000446155 598 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 CBX1P2-201ENST00000453841 458 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 RNU7-125P-201ENST00000458760 62 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 SUMO2P4-201ENST00000504193 276 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC025260.1-201ENST00000548858 430 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC010198.2-201ENST00000550612 259 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AP001542.2-201ENST00000593141 364 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC125494.3-201ENST00000602759 455 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC124312.4-201ENST00000605533 310 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC090425.2-201ENST00000608818 501 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 HULC.1-201ENST00000612720 240 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC024595.1-201ENST00000623088 387 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AC119674.1-212ENST00000641155 993 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AL049737.1-201ENST00000413920 1403 ntBASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AMBRA1Q9C0C7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 ABCC13-202ENST00000463099 3842 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL121886.1-201ENST00000358609 435 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 RNA5SP477-201ENST00000362639 119 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 RN7SKP149-201ENST00000363008 344 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 Y_RNA.201-201ENST00000364052 96 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 SUGT1P2-201ENST00000379452 992 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 Y_RNA.465-201ENST00000384293 102 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 RN7SKP29-201ENST00000410957 272 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms