Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC103968.1-201ENST00000557841 573 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 GTF2IP8-201ENST00000560687 584 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC245052.7-201ENST00000601161 359 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC011453.2-201ENST00000603737 729 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 PRELID3BP8-201ENST00000604148 295 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RMST_5.1-201ENST00000618704 126 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 GDI2P1-201ENST00000429312 1336 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AL592429.1-201ENST00000403909 1473 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 CYP2G2P-201ENST00000594920 1485 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC021242.1-201ENST00000507315 2035 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 OR11H4-201ENST00000315409 1082 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 Y_RNA.159-201ENST00000363674 87 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 PPIAP26-201ENST00000377951 522 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MRPS6P2-201ENST00000381143 370 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 SNORD3H-201ENST00000384486 214 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 RNU6-1068P-201ENST00000410958 103 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MTND4LP17-201ENST00000414607 293 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 LINC01347-201ENST00000417964 355 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 RAD23BP1-201ENST00000421404 1227 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 OR5W1P-201ENST00000423705 938 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL353898.1-201ENST00000444055 238 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL445665.1-202ENST00000452436 324 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MTND1P12-201ENST00000455231 147 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 PSAT1P4-201ENST00000466500 526 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC135999.1-201ENST00000478962 479 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC066616.1-201ENST00000486795 413 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 RPL7P38-201ENST00000488396 739 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 RNU6-559P-201ENST00000516151 98 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AP002404.1-201ENST00000532005 451 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MIR4680-201ENST00000580906 66 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 SNORA74.4-201ENST00000607595 199 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL157817.1-201ENST00000614264 790 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC091544.5-201ENST00000620192 3815 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC135068.12-201ENST00000637370 931 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms