Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC005726.4-201ENST00000582858 458 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RPL7P50-201ENST00000600588 727 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL353662.3-201ENST00000625131 237 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 AL163152.1-201ENST00000642001 374 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 NXF4-202ENST00000416098 1465 ntBASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC28BQ9BUN5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC28BQ9BUN5 AL672167.1-203ENST00000641299 2975 ntBASIC4.65□□□□□ -1.66
CCDC28BQ9BUN5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC28BQ9BUN5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC28BQ9BUN5 HSPD1P14-201ENST00000432666 1618 ntBASIC4.65□□□□□ -1.66
CCDC28BQ9BUN5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC28BQ9BUN5 TMSB4XP4-201ENST00000323496 618 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 DUTP5-201ENST00000406790 469 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 Z74021.1-201ENST00000423610 407 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL445528.1-201ENST00000426330 420 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 RPL34P20-201ENST00000442771 351 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL161636.2-201ENST00000445179 927 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC092647.2-201ENST00000452998 253 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC116562.1-201ENST00000485355 781 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC006499.6-201ENST00000511169 607 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC018442.3-201ENST00000523025 183 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL049839.1-201ENST00000556151 657 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC015912.2-201ENST00000571053 181 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC008759.1-201ENST00000589783 983 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL589674.2-201ENST00000604304 337 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL133445.2-201ENST00000611191 527 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL022401.1-201ENST00000619498 108 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 MIR6837-201ENST00000620884 64 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL359742.1-201ENST00000622497 540 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AL359757.1-201ENST00000623176 255 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC106730.3-201ENST00000624568 641 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 AC024341.1-201ENST00000526444 1552 ntBASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC28BQ9BUN5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 SNORD74.4-201ENST00000364129 80 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-1320P-201ENST00000390838 107 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-1269P-201ENST00000391139 107 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 NANOGP6-201ENST00000429190 847 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RPS17P8-201ENST00000434525 335 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-599P-201ENST00000459383 107 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-1193P-201ENST00000459461 107 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC012158.1-204ENST00000483430 465 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 HMGN2P25-201ENST00000486956 268 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 NPM1P6-201ENST00000521088 871 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 OR8K2P-201ENST00000524645 927 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms