Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL136038.1-201ENST00000497246 351 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC010285.3-201ENST00000511668 676 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 RNU6-760P-201ENST00000516078 97 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 RNA5SP373-201ENST00000517271 95 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC106785.3-201ENST00000564064 847 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 RPL10P14-201ENST00000565265 298 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AL162431.4-201ENST00000604674 411 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC011626.1-201ENST00000604710 562 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AP000894.4-201ENST00000610185 483 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AL359513.1-201ENST00000614364 557 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC007204.2-201ENST00000615022 616 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC005840.5-201ENST00000619166 599 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 AC006453.5-201ENST00000636451 619 ntBASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.09□□□□□ -1.75
CHRDL1Q9BU40 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHRDL1Q9BU40 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CHRDL1Q9BU40 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.09□□□□□ -1.76
CHRDL1Q9BU40 AC023421.1-201ENST00000590535 1785 ntBASIC4.09□□□□□ -1.76
CHRDL1Q9BU40 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.09□□□□□ -1.76
CHRDL1Q9BU40 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 MIR589-201ENST00000385238 99 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 MIR708-201ENST00000390708 88 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 RNA5SP339-201ENST00000390987 122 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 U3.25-201ENST00000391209 220 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC013442.1-201ENST00000397347 228 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 RPS24P12-201ENST00000402084 394 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AL390774.1-201ENST00000411924 246 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AL133325.1-201ENST00000421090 382 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AL353743.4-201ENST00000422653 1547 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 CEACAMP1-201ENST00000434624 1035 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC006042.3-201ENST00000454684 1469 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 GYG1P1-201ENST00000460864 698 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC074386.1-201ENST00000476560 767 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 RPL7P40-201ENST00000481703 745 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 RN7SL814P-201ENST00000487715 300 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 RN7SL447P-201ENST00000494711 245 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 NIFKP7-201ENST00000503365 834 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC126177.5-201ENST00000549599 178 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC245128.3-201ENST00000594721 748 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC009597.2-201ENST00000604659 592 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC004948.1-201ENST00000609858 672 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AC009032.1-201ENST00000617574 431 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AP004607.9-201ENST00000618202 316 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 MIR6886-201ENST00000619864 61 ntBASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRDL1Q9BU40 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.07□□□□□ -1.76
CHRDL1Q9BU40 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHRDL1Q9BU40 AC007529.1-201ENST00000418574 2178 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms