Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC006349.1-201ENST00000555526 235 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX3Q99909 MTCYBP13-201ENST00000578634 1093 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 MIR1269B-201ENST00000580405 75 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC000068.2-201ENST00000608816 460 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 AP003072.4-201ENST00000624580 310 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX3Q99909 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 RNF6P1-201ENST00000444889 1784 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX3Q99909 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 MIR1178-201ENST00000408396 91 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX3Q99909 RPL35AP24-201ENST00000413846 330 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.43□□□□□ -1.7
SSX3Q99909 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 AL133325.1-201ENST00000421090 382 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 BX510359.3-201ENST00000422168 306 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AL121882.1-201ENST00000422893 417 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.43□□□□□ -1.7
SSX3Q99909 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX3Q99909 RPS24P8-201ENST00000431490 402 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX3Q99909 ELOCP3-201ENST00000439303 348 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 MTCYBP21-201ENST00000443300 1113 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AL163193.1-201ENST00000444895 788 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 CYCSP24-201ENST00000445119 316 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC105399.1-202ENST00000447303 205 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 MYO5BP2-201ENST00000449815 1277 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 MTND2P8-201ENST00000450555 1025 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 RPL23AP73-201ENST00000492507 471 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC025459.1-201ENST00000504072 156 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 RN7SKP141-201ENST00000516167 338 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 RN7SKP253-201ENST00000516424 309 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 SCARNA16.4-201ENST00000516956 187 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 SNORA76.2-201ENST00000517095 137 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX3Q99909 AC134698.5-201ENST00000519444 336 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 OR5AN2P-201ENST00000534535 896 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSX3Q99909 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.43□□□□□ -1.7
SSX3Q99909 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX3Q99909 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX3Q99909 RN7SL290P-201ENST00000578661 300 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AP005403.1-201ENST00000579720 229 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX3Q99909 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX3Q99909 MIR4512-201ENST00000583257 77 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX3Q99909 AC115085.1-201ENST00000588924 229 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC010857.1-201ENST00000606398 594 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 AC008115.4-201ENST00000619780 775 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 uc_338.7-201ENST00000621834 124 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 CR392039.4-201ENST00000624968 501 ntBASIC4.43□□□□□ -1.7
SSX3Q99909 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.43□□□□□ -1.7
SSX3Q99909 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSX3Q99909 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSX3Q99909 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX3Q99909 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms