Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 MIR4675-201ENST00000577898 77 ntBASIC4.31□□□□□ -1.72
SKA3Q8IX90 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 AP001521.2-201ENST00000608772 546 ntBASIC4.31□□□□□ -1.72
SKA3Q8IX90 AL592494.3-201ENST00000609485 464 ntBASIC4.31□□□□□ -1.72
SKA3Q8IX90 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 AC068870.2-201ENST00000620635 389 ntBASIC4.31□□□□□ -1.72
SKA3Q8IX90 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SKA3Q8IX90 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SKA3Q8IX90 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.31□□□□□ -1.72
SKA3Q8IX90 INTS6P1-201ENST00000504674 2530 ntBASIC4.31□□□□□ -1.72
SKA3Q8IX90 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SKA3Q8IX90 AC099654.2-201ENST00000433031 1980 ntBASIC4.31□□□□□ -1.72
SKA3Q8IX90 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SKA3Q8IX90 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SKA3Q8IX90 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL133268.1-201ENST00000405676 1401 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 ATP5F1P2-201ENST00000398143 760 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL589647.1-201ENST00000402485 466 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL357515.1-201ENST00000402967 542 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 RPL21P108-201ENST00000413857 481 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC106901.1-201ENST00000425086 698 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 FABP7P2-201ENST00000429946 379 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC112498.1-201ENST00000444401 332 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 RPL31P20-201ENST00000449593 360 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC005008.1-201ENST00000456151 612 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 RPL23AP56-201ENST00000460778 453 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 RNU6-362P-201ENST00000516736 90 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 MYL12AP1-201ENST00000518490 515 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC026688.1-201ENST00000520639 1168 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 OR5AZ1P-201ENST00000527448 943 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC087783.2-201ENST00000605070 562 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 BX322635.1-201ENST00000605804 496 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC133644.2-201ENST00000608142 540 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC131238.1-201ENST00000617135 328 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC090510.2-201ENST00000617465 629 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL158062.1-201ENST00000619632 745 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC112694.2-201ENST00000623697 768 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC067931.1-201ENST00000624190 671 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL353662.3-201ENST00000625131 237 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AL139254.3-201ENST00000641097 674 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC092435.4-201ENST00000623012 4159 ntBASIC4.3□□□□□ -1.72
SKA3Q8IX90 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKA3Q8IX90 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SKA3Q8IX90 AC009643.2-201ENST00000603543 1448 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SKA3Q8IX90 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.29□□□□□ -1.72
SKA3Q8IX90 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SKA3Q8IX90 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SKA3Q8IX90 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SKA3Q8IX90 RNU6-1263P-201ENST00000384601 106 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SKA3Q8IX90 AC009237.10-201ENST00000414112 510 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 GTF2IP5-201ENST00000414608 731 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.29□□□□□ -1.72
SKA3Q8IX90 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.29□□□□□ -1.72
SKA3Q8IX90 AC092162.1-201ENST00000432828 434 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.29□□□□□ -1.72
SKA3Q8IX90 AL606490.8-201ENST00000441624 319 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 SUMO2P1-206ENST00000445436 284 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 AC000111.2-201ENST00000448200 210 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 NPM1P39-201ENST00000449818 867 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 FGF7P3-201ENST00000454645 303 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.29□□□□□ -1.72
SKA3Q8IX90 RN7SL517P-201ENST00000462240 305 ntBASIC4.29□□□□□ -1.72
SKA3Q8IX90 AC116562.1-201ENST00000485355 781 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms