Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM48Q8IWZ4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.9□□□□□ -1.47
TRIM48Q8IWZ4 AC092692.1-201ENST00000623625 2595 ntBASIC5.9□□□□□ -1.47
TRIM48Q8IWZ4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC012254.3-201ENST00000591183 2117 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-500P-201ENST00000362349 107 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RNA5SP510-201ENST00000364697 99 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RPS17P17-201ENST00000419392 409 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 OR2B8P-201ENST00000432841 938 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 SEPT7P5-201ENST00000434048 306 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 USP9YP35-201ENST00000435696 412 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RPL7P29-201ENST00000437151 728 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 BX679664.2-201ENST00000439282 283 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 MTCO2P25-201ENST00000447065 681 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL445466.1-201ENST00000448432 357 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RPL23AP60-201ENST00000450011 454 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 OR6C5P-201ENST00000452388 923 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RFC5P1-201ENST00000454419 874 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 MTND1P16-201ENST00000465177 898 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 CDC42P4-201ENST00000510507 563 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 GTF2F2P1-201ENST00000511083 675 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 OR6M2P-201ENST00000529831 871 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AP001317.1-201ENST00000531194 960 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 MIR4666A-201ENST00000580160 79 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 BNIP3P30-201ENST00000601184 574 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC090186.1-201ENST00000605991 572 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC108673.3-201ENST00000609183 335 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC005840.5-201ENST00000619166 599 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL357562.1-201ENST00000624911 609 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AC127502.3-201ENST00000636170 1206 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL138820.1-201ENST00000617901 5305 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RBPJP7-201ENST00000442803 1447 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 RBPJP5-201ENST00000449433 1447 ntBASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM48Q8IWZ4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 CCT8P1-201ENST00000413611 1657 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 MTND5P23-201ENST00000430812 1655 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AL603750.1-201ENST00000624216 1717 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AP000432.2-201ENST00000624164 2048 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms