Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ATP5LP5-201ENST00000483050 299 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 RN7SL284P-201ENST00000498823 275 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 NDUFB4P12-201ENST00000513465 390 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AL049872.1-201ENST00000556323 322 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC087465.1-201ENST00000560574 245 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 MIR4719-201ENST00000585233 84 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AP001269.3-201ENST00000588718 329 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC106791.2-201ENST00000604680 391 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC017083.3-201ENST00000609955 700 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC073114.1-201ENST00000612027 490 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AL158063.1-201ENST00000615349 536 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC126175.1-201ENST00000617041 758 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 AC007494.3-201ENST00000624660 743 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VRK3Q8IV63 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 ZNF849P-201ENST00000594711 1566 ntBASIC5.45□□□□□ -1.54
VRK3Q8IV63 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VRK3Q8IV63 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VRK3Q8IV63 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VRK3Q8IV63 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VRK3Q8IV63 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL137141.1-201ENST00000624622 4836 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL132640.2-201ENST00000559968 1698 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 Y_RNA.3-201ENST00000362331 103 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 RNU6-1215P-201ENST00000384441 102 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 MT-RNR2-201ENST00000387347 1559 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL133264.1-201ENST00000407157 562 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 RN7SKP286-201ENST00000410894 299 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 MTND1P23-201ENST00000416931 372 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 GLUD1P9-201ENST00000420997 1173 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 RPL12P11-201ENST00000439970 501 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 YWHAEP1-201ENST00000453697 763 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 OR2AF1P-201ENST00000454899 889 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 NECAP1P2-201ENST00000455668 727 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 SETP20-201ENST00000457046 852 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC010424.1-201ENST00000506336 297 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 UGT2A3P7-201ENST00000510485 734 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 MTND4LP26-201ENST00000518144 282 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL049830.4-201ENST00000555149 351 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC006362.1-201ENST00000567392 174 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL121834.1-201ENST00000572284 509 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC091135.1-201ENST00000585943 307 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 RSL24D1P11-201ENST00000591045 491 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL031775.1-201ENST00000607014 887 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC019080.5-201ENST00000624891 757 ntBASIC5.44□□□□□ -1.54
VRK3Q8IV63 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
VRK3Q8IV63 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms