Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 MIR585-201ENST00000384887 94 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 EI24P3-201ENST00000399046 1062 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 HMGB1P13-201ENST00000406019 642 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC104333.2-201ENST00000422630 192 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 RBMY2QP-201ENST00000429799 1147 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 RPL17P35-201ENST00000432217 549 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AL035458.1-201ENST00000433096 585 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC002456.2-201ENST00000509356 380 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC004980.4-201ENST00000513375 203 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 IGKV2D-10-201ENST00000520194 281 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AP001922.4-201ENST00000526967 290 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 OR1F2P-201ENST00000570470 933 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 MIR4436B2-201ENST00000581415 91 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 MIR4436B1-201ENST00000583272 91 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 MIR3936-201ENST00000584304 110 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC123786.2-201ENST00000603459 275 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AL353662.3-201ENST00000625131 237 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC063976.2-201ENST00000425667 3556 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AL672167.1-204ENST00000641875 3017 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 PANDAR-201ENST00000629595 1506 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 HSPD1P11-201ENST00000508643 1702 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC103591.2-201ENST00000265259 766 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 RNU6-650P-201ENST00000365658 111 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 RNU6-178P-201ENST00000384631 104 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC010385.1-201ENST00000412374 256 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 XKRYP4-201ENST00000414395 483 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LINC01881-201ENST00000416103 412 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC009238.2-201ENST00000431026 355 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 PSMD10P3-201ENST00000437000 448 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC006466.1-201ENST00000438721 289 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 ELOCP3-201ENST00000439303 348 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 ELOCP10-201ENST00000440624 327 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 GTF3AP5-201ENST00000442645 697 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 XKRYP5-201ENST00000449659 483 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 RNU6-1218P-201ENST00000458990 108 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC097484.1-201ENST00000471148 389 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC097173.1-201ENST00000505862 819 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 SNORA31.13-201ENST00000516624 135 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 SNORA76.2-201ENST00000517095 137 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 PCNPP1-201ENST00000552501 511 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AL109741.3-201ENST00000561748 592 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC079148.1-201ENST00000565944 819 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 PSMA6P4-201ENST00000603247 718 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 ELOCP34-201ENST00000604436 327 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 DDX18P4-201ENST00000511690 1966 ntBASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF39Q86UA1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
PRPF39Q86UA1 AC093311.1-201ENST00000506586 2021 ntBASIC5.23□□□□□ -1.57
PRPF39Q86UA1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms