Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RAD1P1-201ENST00000231383 813 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RNU6-452P-201ENST00000384406 107 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 MTND4P24-201ENST00000424002 397 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC009965.2-201ENST00000425328 970 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 OR2AH1P-201ENST00000425717 928 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL031584.1-201ENST00000447169 754 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 FAR2P1-206ENST00000449736 709 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RN7SL799P-201ENST00000475891 298 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC093663.2-201ENST00000484625 313 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 ENPP7P9-201ENST00000514456 627 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL049830.4-201ENST00000555149 351 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC105254.2-201ENST00000603636 436 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC090525.3-201ENST00000605601 189 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AL355802.4-201ENST00000607635 548 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC100847.1-201ENST00000611316 481 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC009318.3-201ENST00000616916 503 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 AC008115.4-201ENST00000619780 775 ntBASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
WDR88Q6ZMY6 LINC01109-201ENST00000603837 3081 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 LINC01355-201ENST00000566551 5444 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 SNORA62.2-201ENST00000364672 152 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC005522.1-201ENST00000395416 346 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AL358176.3-201ENST00000420757 454 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 FAM204CP-201ENST00000424489 642 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 RHOT1P3-201ENST00000436571 331 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 KNOP1P3-201ENST00000446933 426 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 TPT1P1-201ENST00000458495 518 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 RNA5SP103-201ENST00000459503 118 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 RN7SL172P-201ENST00000460535 303 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC138938.1-201ENST00000515431 782 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC027308.1-201ENST00000517993 110 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC026688.1-201ENST00000520639 1168 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC068446.3-201ENST00000555285 382 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC110743.1-201ENST00000584870 478 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 VN1R84P-201ENST00000593697 235 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AC104687.2-201ENST00000604442 342 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 TAS2R6P-201ENST00000605022 826 ntBASIC4.54□□□□□ -1.68
WDR88Q6ZMY6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms