Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC079448.1-201ENST00000449377 373 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC139272.1-201ENST00000505516 640 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 CYP4F27P-201ENST00000514557 494 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC009977.1-201ENST00000586015 570 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC011453.2-201ENST00000603737 729 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 SNRPGP17-201ENST00000603780 214 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AL391646.1-201ENST00000603860 190 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 STMN1P1-201ENST00000617809 440 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 AC108467.2-201ENST00000617640 1597 ntBASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXR1Q6PIV2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 MIR369-201ENST00000362155 70 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RNU6-543P-201ENST00000362576 108 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RNU5D-1-201ENST00000363299 116 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RNU6-1309P-201ENST00000363305 108 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RNU12-2P-201ENST00000364789 156 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 Y_RNA.401-201ENST00000383965 117 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 MIR568-201ENST00000385036 95 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 MIR187-201ENST00000385062 109 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RN7SKP279-201ENST00000411383 298 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AL713922.1-201ENST00000416477 747 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 NENFP1-201ENST00000419476 466 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 CYCSP11-201ENST00000436426 315 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 SUMO1P3-201ENST00000439961 304 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 CALM1P1-201ENST00000442082 433 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 TVP23CP1-201ENST00000450317 639 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RNU6-420P-201ENST00000458780 107 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RPS16P9-201ENST00000477220 427 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RPL7L1P13-201ENST00000511702 739 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 SCARNA18.2-201ENST00000516882 84 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AL390334.1-201ENST00000556395 450 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RN7SL426P-201ENST00000579106 295 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC113139.1-201ENST00000605049 239 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC018695.5-201ENST00000605872 315 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC113361.1-201ENST00000606683 543 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 MIR6780B-201ENST00000610307 79 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC091905.1-201ENST00000624400 311 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC026108.1-201ENST00000635444 547 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC110994.2-201ENST00000635481 492 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AL590396.3-201ENST00000636334 300 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AL354702.2-202ENST00000641481 890 ntBASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
FOXR1Q6PIV2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms