Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL445584.1-201ENST00000431451 330 ntBASIC4.45□□□□□ -1.7
RIF1Q5UIP0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.45□□□□□ -1.7
RIF1Q5UIP0 RPS27AP13-201ENST00000498403 237 ntBASIC4.45□□□□□ -1.7
RIF1Q5UIP0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RIF1Q5UIP0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RIF1Q5UIP0 AC060780.2-201ENST00000589047 198 ntBASIC4.45□□□□□ -1.7
RIF1Q5UIP0 U6.105-201ENST00000637379 88 ntBASIC4.45□□□□□ -1.7
RIF1Q5UIP0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.45□□□□□ -1.7
RIF1Q5UIP0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC024560.2-201ENST00000507981 1497 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC007529.1-201ENST00000418574 2178 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC008758.3-201ENST00000507003 1829 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL451139.1-201ENST00000434718 346 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL450023.3-201ENST00000440592 271 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 TVP23BP1-201ENST00000557500 617 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC116312.1-201ENST00000606841 314 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC108359.1-201ENST00000616451 1211 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 MIR34B-201ENST00000385076 84 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL583835.1-201ENST00000399570 407 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC090804.1-201ENST00000448870 490 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC090515.3-201ENST00000560431 315 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 AC015967.1-201ENST00000619893 476 ntBASIC4.44□□□□□ -1.7
RIF1Q5UIP0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 MRPL50P1-201ENST00000431951 384 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 FABP5P2-201ENST00000439042 408 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC104978.1-201ENST00000449387 391 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 SEPT10P1-201ENST00000517342 1162 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 GLUD1P9-201ENST00000420997 1173 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AP000907.1-201ENST00000428428 510 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC090018.1-201ENST00000434369 367 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.43□□□□□ -1.7
RIF1Q5UIP0 RN7SL691P-201ENST00000494487 301 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 MIR4301-201ENST00000577203 66 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 AC130448.2-201ENST00000624082 374 ntBASIC4.43□□□□□ -1.7
RIF1Q5UIP0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 RNA5SP130-201ENST00000364431 114 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 AL035696.2-201ENST00000407941 709 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 AC068533.1-201ENST00000418542 415 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.42□□□□□ -1.7
RIF1Q5UIP0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 AC006499.5-201ENST00000505037 514 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 SOD1P3-201ENST00000518682 454 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 DUXAP2-201ENST00000519198 589 ntBASIC4.42□□□□□ -1.7
RIF1Q5UIP0 TRMT10BP1-201ENST00000519377 943 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms