Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 FTH1P16-201ENST00000435241 552 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 AL161722.1-201ENST00000446972 1032 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 TPT1P12-201ENST00000448968 492 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.41□□□□□ -1.54
GABPAQ06546 NPM1P28-201ENST00000492269 840 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 ASNSP4-201ENST00000511103 447 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 SNORA70.11-201ENST00000515987 138 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 SNORA70.13-201ENST00000516116 138 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.41□□□□□ -1.54
GABPAQ06546 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
GABPAQ06546 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.41□□□□□ -1.54
GABPAQ06546 AC079791.1-201ENST00000605356 973 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 AC108467.2-201ENST00000617640 1597 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.41□□□□□ -1.54
GABPAQ06546 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 AC116158.1-201ENST00000560231 2129 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GABPAQ06546 AC026951.1-201ENST00000559530 2459 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GABPAQ06546 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.4□□□□□ -1.54
GABPAQ06546 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GABPAQ06546 AC240504.1-201ENST00000395709 845 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AL358178.1-201ENST00000407698 397 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.4□□□□□ -1.54
GABPAQ06546 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GABPAQ06546 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.4□□□□□ -1.54
GABPAQ06546 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.4□□□□□ -1.54
GABPAQ06546 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.4□□□□□ -1.54
GABPAQ06546 AC073143.1-201ENST00000436316 395 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 RPL21P133-201ENST00000443666 476 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 RNU6-775P-201ENST00000459318 96 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AC011276.1-201ENST00000469688 323 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 SUMO2P4-201ENST00000504193 276 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AC098799.3-201ENST00000506095 438 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 PRELID3BP5-201ENST00000508612 460 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.4□□□□□ -1.54
GABPAQ06546 RN7SKP122-201ENST00000515923 296 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AC020937.1-201ENST00000519677 1013 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.4□□□□□ -1.54
GABPAQ06546 AL359219.2-201ENST00000555184 348 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 EIF1AXP2-201ENST00000555940 413 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.4□□□□□ -1.54
GABPAQ06546 AC005962.2-201ENST00000611427 652 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 AC008833.1-201ENST00000611633 691 ntBASIC5.4□□□□□ -1.54
GABPAQ06546 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GABPAQ06546 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.4□□□□□ -1.54
GABPAQ06546 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GABPAQ06546 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GABPAQ06546 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GABPAQ06546 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
GABPAQ06546 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GABPAQ06546 AL391684.1-202ENST00000641293 1636 ntBASIC5.4□□□□□ -1.55
GABPAQ06546 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GABPAQ06546 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.4□□□□□ -1.55
GABPAQ06546 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
GABPAQ06546 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
GABPAQ06546 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 UGT2B26P-201ENST00000508672 1613 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 SNORA70.2-201ENST00000364506 135 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 RNA5SP509-201ENST00000364577 119 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.39□□□□□ -1.55
GABPAQ06546 AC234779.1-201ENST00000425910 285 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.39□□□□□ -1.55
GABPAQ06546 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.39□□□□□ -1.55
GABPAQ06546 RPL23AP93-201ENST00000440847 484 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.39□□□□□ -1.55
GABPAQ06546 AL935212.3-201ENST00000450729 284 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 OR6C72P-201ENST00000451403 892 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.39□□□□□ -1.55
GABPAQ06546 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.39□□□□□ -1.55
GABPAQ06546 AC016687.1-201ENST00000482574 353 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.39□□□□□ -1.55
GABPAQ06546 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.39□□□□□ -1.55
GABPAQ06546 AL121890.3-201ENST00000618494 516 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 AP005019.3-201ENST00000620418 560 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 AP005435.3-201ENST00000531260 3198 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 AC125336.1-201ENST00000508893 2827 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 AC108751.5-201ENST00000492880 1336 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.39□□□□□ -1.55
GABPAQ06546 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
GABPAQ06546 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
GABPAQ06546 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GABPAQ06546 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.38□□□□□ -1.55
GABPAQ06546 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GABPAQ06546 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GABPAQ06546 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.38□□□□□ -1.55
GABPAQ06546 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.38□□□□□ -1.55
GABPAQ06546 AC020633.1-201ENST00000468439 2247 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.38□□□□□ -1.55
GABPAQ06546 RSL24D1P6-201ENST00000426934 401 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 EIF2S2P3-201ENST00000428356 999 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms