Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
HSPG2P98160 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HSPG2P98160 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HSPG2P98160 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC2.71□□□□□ -1.98
HSPG2P98160 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HSPG2P98160 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC2.7□□□□□ -1.98
HSPG2P98160 AL133244.1-201ENST00000456007 258 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.7□□□□□ -1.98
HSPG2P98160 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC027667.1-201ENST00000545814 304 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 BPIFA4P-203ENST00000603168 689 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 MIR3065-201ENST00000390137 79 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 SNORA48.2-201ENST00000390926 124 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AC016772.1-201ENST00000444170 1261 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 PRDX3P3-201ENST00000447765 522 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC2.7□□□□□ -1.98
HSPG2P98160 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 DMD-222ENST00000474231 5209 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 AP001273.1-201ENST00000624493 3152 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 TBCAP1-201ENST00000436520 327 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AC233982.1-201ENST00000451247 436 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 RPL5P24-201ENST00000463742 885 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC005868.1-201ENST00000536421 331 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC015912.2-201ENST00000571053 181 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AP005019.3-201ENST00000620418 560 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.7□□□□□ -1.98
HSPG2P98160 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.7□□□□□ -1.98
HSPG2P98160 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC2.7□□□□□ -1.98
HSPG2P98160 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 RNVU1-14-201ENST00000384770 164 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 MIR490-201ENST00000384865 128 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.7□□□□□ -1.98
HSPG2P98160 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC2.7□□□□□ -1.98
HSPG2P98160 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 AC021193.1-201ENST00000511607 420 ntBASIC2.7□□□□□ -1.98
HSPG2P98160 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.7□□□□□ -1.98
HSPG2P98160 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC2.7□□□□□ -1.98
HSPG2P98160 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HSPG2P98160 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HSPG2P98160 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC2.7□□□□□ -1.98
HSPG2P98160 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC2.69□□□□□ -1.98
HSPG2P98160 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC105074.1-201ENST00000623380 3095 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HSPG2P98160 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 AL031121.1-201ENST00000406553 254 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC2.69□□□□□ -1.98
HSPG2P98160 OR4F13P-201ENST00000428478 931 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 RNA5SP246-201ENST00000458909 119 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 MTND6P6-201ENST00000478031 263 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AC016559.2-201ENST00000510759 359 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.69□□□□□ -1.98
HSPG2P98160 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 AL603750.1-201ENST00000624216 1717 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms