Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CASC19-248ENST00000641674 1356 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 MTND4P31-201ENST00000425607 1343 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CX3CL1P78423 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 RN7SKP124-201ENST00000364730 341 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 PPIAP9-201ENST00000403866 498 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL590290.1-201ENST00000405336 380 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 LIPT1P1-201ENST00000415870 1186 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.32□□□□□ -1.72
CX3CL1P78423 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 NPM1P22-201ENST00000427761 952 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC012075.1-201ENST00000436549 580 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 Z80107.1-201ENST00000436830 412 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 TPTE2P6-202ENST00000445572 1007 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AL009048.1-201ENST00000450437 298 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 DNAJC19P8-201ENST00000452887 259 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL354710.1-201ENST00000453641 246 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 RPL10P17-201ENST00000453852 316 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CL1P78423 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 RNU7-140P-201ENST00000459546 60 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CX3CL1P78423 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AL161747.1-201ENST00000480068 358 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC104109.1-201ENST00000498563 436 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC093752.1-206ENST00000511823 336 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CL1P78423 PRELID3BP4-201ENST00000515476 571 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 RNU6-1028P-201ENST00000517164 93 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 MTND2P32-201ENST00000521584 1038 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC087897.1-201ENST00000550134 156 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 MTND1P8-201ENST00000571424 950 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC006946.3-201ENST00000609791 756 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 BNIP3P41-202ENST00000616656 861 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AL121890.2-201ENST00000617644 465 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC091932.2-201ENST00000623014 291 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC104985.3-201ENST00000623479 597 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 TTC39DP-201ENST00000416781 1688 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 AC008079.2-201ENST00000623543 20396 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CL1P78423 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AL133268.1-201ENST00000405676 1401 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC104260.2-201ENST00000623551 3497 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 MIR323A-201ENST00000362199 86 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 RNU6-1339P-201ENST00000363574 91 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 RNU6-353P-201ENST00000364266 108 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC002524.1-201ENST00000411687 547 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC211486.3-201ENST00000412694 621 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 TAF13P2-201ENST00000416876 286 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 NAP1L4P2-201ENST00000425958 899 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 USP12PY-201ENST00000427677 1064 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AL389925.1-201ENST00000432257 728 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC009263.1-201ENST00000441193 1239 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC105399.1-202ENST00000447303 205 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AL672138.1-201ENST00000450604 1015 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms