Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.55□□□□□ -1.68
SKP1P63208 OTX2P1-201ENST00000450956 354 ntBASIC4.55□□□□□ -1.68
SKP1P63208 AC006967.1-201ENST00000467608 589 ntBASIC4.55□□□□□ -1.68
SKP1P63208 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.55□□□□□ -1.68
SKP1P63208 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.55□□□□□ -1.68
SKP1P63208 AC008147.3-201ENST00000548666 354 ntBASIC4.55□□□□□ -1.68
SKP1P63208 UBE2FP2-201ENST00000566646 462 ntBASIC4.55□□□□□ -1.68
SKP1P63208 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.55□□□□□ -1.68
SKP1P63208 CYCSP40-201ENST00000575927 294 ntBASIC4.55□□□□□ -1.68
SKP1P63208 MTND2P13-201ENST00000577438 1039 ntBASIC4.55□□□□□ -1.68
SKP1P63208 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.55□□□□□ -1.68
SKP1P63208 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.55□□□□□ -1.68
SKP1P63208 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.55□□□□□ -1.68
SKP1P63208 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.55□□□□□ -1.68
SKP1P63208 AL023881.1-201ENST00000621088 301 ntBASIC4.55□□□□□ -1.68
SKP1P63208 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.55□□□□□ -1.68
SKP1P63208 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SKP1P63208 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SKP1P63208 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 CASC19-204ENST00000641001 2055 ntBASIC4.55□□□□□ -1.68
SKP1P63208 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SKP1P63208 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SKP1P63208 AC087190.4-201ENST00000574616 8334 ntBASIC4.54□□□□□ -1.68
SKP1P63208 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 RNU6-1331P-201ENST00000363658 106 ntBASIC4.54□□□□□ -1.68
SKP1P63208 U3.30-201ENST00000391308 210 ntBASIC4.54□□□□□ -1.68
SKP1P63208 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 AC099336.2-201ENST00000422457 254 ntBASIC4.54□□□□□ -1.68
SKP1P63208 PA2G4P6-201ENST00000438325 1197 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AC099560.2-201ENST00000457554 255 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 PGBD4P4-201ENST00000509673 613 ntBASIC4.54□□□□□ -1.68
SKP1P63208 RN7SKP276-201ENST00000516242 268 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 SOX5P1-201ENST00000524155 1127 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
SKP1P63208 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.54□□□□□ -1.68
SKP1P63208 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 MIR5699-201ENST00000578903 90 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AP005119.2-201ENST00000579735 1105 ntBASIC4.54□□□□□ -1.68
SKP1P63208 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.54□□□□□ -1.68
SKP1P63208 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.54□□□□□ -1.68
SKP1P63208 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SKP1P63208 CASC19-206ENST00000641028 1430 ntBASIC4.54□□□□□ -1.68
SKP1P63208 AL451142.2-201ENST00000429076 2090 ntBASIC4.53□□□□□ -1.68
SKP1P63208 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 AC091046.3-201ENST00000631455 1574 ntBASIC4.53□□□□□ -1.68
SKP1P63208 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.53□□□□□ -1.68
SKP1P63208 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.53□□□□□ -1.68
SKP1P63208 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.53□□□□□ -1.68
SKP1P63208 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 SNORA71.2-201ENST00000364941 134 ntBASIC4.53□□□□□ -1.68
SKP1P63208 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SKP1P63208 AC093719.1-202ENST00000392735 373 ntBASIC4.53□□□□□ -1.68
SKP1P63208 RPL10P10-201ENST00000403509 664 ntBASIC4.53□□□□□ -1.68
SKP1P63208 RNU2-50P-201ENST00000410494 143 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AL591848.1-201ENST00000413092 322 ntBASIC4.53□□□□□ -1.68
SKP1P63208 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.53□□□□□ -1.68
SKP1P63208 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms