Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
AP1S1P61966 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
AP1S1P61966 OR56B2P-201ENST00000317102 954 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 RNU6-398P-201ENST00000384143 109 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 SNORA68.2-201ENST00000391263 128 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 RPL6P21-201ENST00000418672 846 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 TRGV5P-201ENST00000419915 354 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 FABP7P2-201ENST00000429946 379 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.65□□□□□ -1.67
AP1S1P61966 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 RPL23AP72-201ENST00000492447 435 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.65□□□□□ -1.67
AP1S1P61966 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.65□□□□□ -1.67
AP1S1P61966 RN7SKP46-201ENST00000515942 234 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.65□□□□□ -1.67
AP1S1P61966 MIR4700-201ENST00000578311 74 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.65□□□□□ -1.67
AP1S1P61966 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.65□□□□□ -1.67
AP1S1P61966 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 COX6CP4-201ENST00000605798 228 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 MIR6820-201ENST00000611508 62 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.65□□□□□ -1.67
AP1S1P61966 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
AP1S1P61966 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 AL355852.1-201ENST00000454081 1771 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.65□□□□□ -1.67
AP1S1P61966 LINC01355-201ENST00000566551 5444 ntBASIC4.65□□□□□ -1.67
AP1S1P61966 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP1S1P61966 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 AL391684.1-202ENST00000641293 1636 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC093775.1-201ENST00000624154 1868 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 MAPK10-349ENST00000641767 3661 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 MFSD8-216ENST00000641147 4009 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 AC021146.4-201ENST00000309229 279 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
AP1S1P61966 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
AP1S1P61966 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.64□□□□□ -1.67
AP1S1P61966 AC245028.1-201ENST00000423259 256 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 RPL21P43-201ENST00000425440 472 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC011753.3-201ENST00000443436 406 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
AP1S1P61966 AL591473.1-201ENST00000464297 313 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC112206.1-201ENST00000468416 477 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC008897.1-201ENST00000494006 347 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
AP1S1P61966 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.64□□□□□ -1.67
AP1S1P61966 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
AP1S1P61966 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.64□□□□□ -1.67
AP1S1P61966 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 AC005520.3-201ENST00000602874 370 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC133552.5-201ENST00000604266 540 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC019193.2-201ENST00000610012 634 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 AC097505.1-201ENST00000610199 565 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.64□□□□□ -1.67
AP1S1P61966 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
AP1S1P61966 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 AC104118.1-201ENST00000607625 1589 ntBASIC4.64□□□□□ -1.67
AP1S1P61966 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
AP1S1P61966 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
AP1S1P61966 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
AP1S1P61966 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
AP1S1P61966 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP1S1P61966 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.63□□□□□ -1.67
AP1S1P61966 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP1S1P61966 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP1S1P61966 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.63□□□□□ -1.67
AP1S1P61966 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AP1S1P61966 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP1S1P61966 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP1S1P61966 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
AP1S1P61966 RNA5SP505-201ENST00000364748 108 ntBASIC4.63□□□□□ -1.67
AP1S1P61966 MIR921-201ENST00000401133 56 ntBASIC4.63□□□□□ -1.67
AP1S1P61966 MIR1271-201ENST00000408537 86 ntBASIC4.63□□□□□ -1.67
AP1S1P61966 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.63□□□□□ -1.67
AP1S1P61966 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.63□□□□□ -1.67
AP1S1P61966 UQCRBP1-201ENST00000421129 336 ntBASIC4.63□□□□□ -1.67
AP1S1P61966 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.63□□□□□ -1.67
AP1S1P61966 AK4P6-201ENST00000505168 528 ntBASIC4.63□□□□□ -1.67
AP1S1P61966 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.63□□□□□ -1.67
AP1S1P61966 BTG4P1-201ENST00000510421 183 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms