Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LINC00993-201ENST00000420453 540 ntBASIC4□□□□□ -1.77
AP3S2P59780 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP3S2P59780 RPL23AP4-201ENST00000427757 463 ntBASIC4□□□□□ -1.77
AP3S2P59780 NANOGP6-201ENST00000429190 847 ntBASIC4□□□□□ -1.77
AP3S2P59780 AL161636.2-201ENST00000445179 927 ntBASIC4□□□□□ -1.77
AP3S2P59780 EEF1B2P3-201ENST00000447718 678 ntBASIC4□□□□□ -1.77
AP3S2P59780 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4□□□□□ -1.77
AP3S2P59780 HMGB3P21-201ENST00000452483 547 ntBASIC4□□□□□ -1.77
AP3S2P59780 SEPT14P1-201ENST00000458703 648 ntBASIC4□□□□□ -1.77
AP3S2P59780 RN7SL222P-201ENST00000476452 299 ntBASIC4□□□□□ -1.77
AP3S2P59780 METTL15P1-201ENST00000481421 1045 ntBASIC4□□□□□ -1.77
AP3S2P59780 RPS6P4-201ENST00000494693 758 ntBASIC4□□□□□ -1.77
AP3S2P59780 HAUS1P1-201ENST00000505275 832 ntBASIC4□□□□□ -1.77
AP3S2P59780 PARP4P3-201ENST00000510265 317 ntBASIC4□□□□□ -1.77
AP3S2P59780 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4□□□□□ -1.77
AP3S2P59780 AC025423.2-201ENST00000537570 439 ntBASIC4□□□□□ -1.77
AP3S2P59780 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP3S2P59780 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4□□□□□ -1.77
AP3S2P59780 MIR4716-201ENST00000579628 84 ntBASIC4□□□□□ -1.77
AP3S2P59780 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4□□□□□ -1.77
AP3S2P59780 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4□□□□□ -1.77
AP3S2P59780 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4□□□□□ -1.77
AP3S2P59780 GMCL1P2-201ENST00000605230 823 ntBASIC4□□□□□ -1.77
AP3S2P59780 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4□□□□□ -1.77
AP3S2P59780 AC074276.2-201ENST00000619891 348 ntBASIC4□□□□□ -1.77
AP3S2P59780 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4□□□□□ -1.77
AP3S2P59780 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
AP3S2P59780 AC068254.2-201ENST00000623938 3577 ntBASIC4□□□□□ -1.77
AP3S2P59780 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4□□□□□ -1.77
AP3S2P59780 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
AP3S2P59780 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.99□□□□□ -1.77
AP3S2P59780 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 AL031119.1-201ENST00000404707 1879 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
AP3S2P59780 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
AP3S2P59780 RNU1-15P-201ENST00000353977 144 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
AP3S2P59780 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 MIR3074-201ENST00000384885 81 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AL078604.1-201ENST00000404609 466 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 FCF1P5-201ENST00000406490 482 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 BX119904.1-201ENST00000432026 348 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 AP000281.1-201ENST00000444036 316 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 AC104306.1-201ENST00000449702 371 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.99□□□□□ -1.77
AP3S2P59780 SCARNA10-201ENST00000459255 330 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.99□□□□□ -1.77
AP3S2P59780 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 MTND6P6-201ENST00000478031 263 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AC044810.1-201ENST00000480271 711 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 RN7SL244P-201ENST00000493405 297 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 COX6B1P5-201ENST00000509843 249 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 MRPS5P3-201ENST00000515577 166 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 NPM1P35-201ENST00000533043 868 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AC126177.5-201ENST00000549599 178 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AL352979.3-201ENST00000553515 247 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AC007424.1-203ENST00000554613 687 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.99□□□□□ -1.77
AP3S2P59780 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.99□□□□□ -1.77
AP3S2P59780 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.99□□□□□ -1.77
AP3S2P59780 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 AL357153.4-201ENST00000620487 1016 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 MIR6806-201ENST00000622141 64 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.99□□□□□ -1.77
AP3S2P59780 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 AC110792.3-201ENST00000595906 1614 ntBASIC3.99□□□□□ -1.77
AP3S2P59780 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP3S2P59780 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
AP3S2P59780 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
AP3S2P59780 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 SNORA17.1-201ENST00000362945 126 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 RN7SKP160-201ENST00000363804 340 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms