Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 IGKV7-3-201ENST00000357453 298 ntBASIC5.27□□□□□ -1.57
VCPP55072 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 RNU1-85P-201ENST00000364127 164 ntBASIC5.27□□□□□ -1.57
VCPP55072 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VCPP55072 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 AL359837.1-201ENST00000381357 287 ntBASIC5.27□□□□□ -1.57
VCPP55072 SNORA2.3-201ENST00000383920 135 ntBASIC5.27□□□□□ -1.57
VCPP55072 MIR134-201ENST00000385258 73 ntBASIC5.27□□□□□ -1.57
VCPP55072 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.27□□□□□ -1.57
VCPP55072 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 AC013429.2-201ENST00000418798 781 ntBASIC5.27□□□□□ -1.57
VCPP55072 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 AL389915.1-201ENST00000422463 466 ntBASIC5.27□□□□□ -1.57
VCPP55072 AL359265.2-201ENST00000434367 631 ntBASIC5.27□□□□□ -1.57
VCPP55072 AC000374.1-201ENST00000434698 1745 ntBASIC5.27□□□□□ -1.57
VCPP55072 AL138787.1-202ENST00000437804 898 ntBASIC5.27□□□□□ -1.57
VCPP55072 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.27□□□□□ -1.57
VCPP55072 AC022034.3-201ENST00000471393 478 ntBASIC5.27□□□□□ -1.57
VCPP55072 AC011005.3-201ENST00000491624 395 ntBASIC5.27□□□□□ -1.57
VCPP55072 RN7SL441P-201ENST00000492388 296 ntBASIC5.27□□□□□ -1.57
VCPP55072 RN7SL244P-201ENST00000493405 297 ntBASIC5.27□□□□□ -1.57
VCPP55072 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.27□□□□□ -1.57
VCPP55072 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.27□□□□□ -1.57
VCPP55072 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
VCPP55072 SETP1-201ENST00000556014 845 ntBASIC5.27□□□□□ -1.57
VCPP55072 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.27□□□□□ -1.57
VCPP55072 NDUFB4P11-201ENST00000560510 395 ntBASIC5.27□□□□□ -1.57
VCPP55072 AGGF1P9-201ENST00000561884 913 ntBASIC5.27□□□□□ -1.57
VCPP55072 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 NF1P10-201ENST00000613227 742 ntBASIC5.27□□□□□ -1.57
VCPP55072 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VCPP55072 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 AP001642.1-201ENST00000624727 2117 ntBASIC5.27□□□□□ -1.57
VCPP55072 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.27□□□□□ -1.57
VCPP55072 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 AL122126.1-201ENST00000546905 1318 ntBASIC5.26□□□□□ -1.57
VCPP55072 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.26□□□□□ -1.57
VCPP55072 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
VCPP55072 SNORA66-201ENST00000384792 133 ntBASIC5.26□□□□□ -1.57
VCPP55072 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.26□□□□□ -1.57
VCPP55072 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 AC013470.3-201ENST00000420252 1194 ntBASIC5.26□□□□□ -1.57
VCPP55072 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 RPL34P6-201ENST00000432390 345 ntBASIC5.26□□□□□ -1.57
VCPP55072 UBE2V2P1-201ENST00000434717 398 ntBASIC5.26□□□□□ -1.57
VCPP55072 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.26□□□□□ -1.57
VCPP55072 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 KNOP1P3-201ENST00000446933 426 ntBASIC5.26□□□□□ -1.57
VCPP55072 AC004980.3-201ENST00000447046 365 ntBASIC5.26□□□□□ -1.57
VCPP55072 HSPE1P22-201ENST00000456856 327 ntBASIC5.26□□□□□ -1.57
VCPP55072 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.26□□□□□ -1.57
VCPP55072 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.26□□□□□ -1.57
VCPP55072 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VCPP55072 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.26□□□□□ -1.57
VCPP55072 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VCPP55072 AL512782.1-201ENST00000603093 364 ntBASIC5.26□□□□□ -1.57
VCPP55072 AL135786.2-201ENST00000608422 615 ntBASIC5.26□□□□□ -1.57
VCPP55072 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 AL121873.1-201ENST00000616013 524 ntBASIC5.26□□□□□ -1.57
VCPP55072 AC015914.2-201ENST00000618167 288 ntBASIC5.26□□□□□ -1.57
VCPP55072 AC008785.1-201ENST00000624475 456 ntBASIC5.26□□□□□ -1.57
VCPP55072 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
VCPP55072 KARSP3-201ENST00000571212 1504 ntBASIC5.26□□□□□ -1.57
VCPP55072 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.26□□□□□ -1.57
VCPP55072 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VCPP55072 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.26□□□□□ -1.57
VCPP55072 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VCPP55072 AL672167.1-204ENST00000641875 3017 ntBASIC5.26□□□□□ -1.57
VCPP55072 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VCPP55072 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VCPP55072 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.25□□□□□ -1.57
VCPP55072 AL022393.1-201ENST00000625142 1677 ntBASIC5.25□□□□□ -1.57
VCPP55072 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms