Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC116447.1-201ENST00000613153 453 ntBASIC5.17□□□□□ -1.58
SSR1P43307 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.17□□□□□ -1.58
SSR1P43307 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.17□□□□□ -1.58
SSR1P43307 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
SSR1P43307 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SSR1P43307 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 CUL4AP1-201ENST00000514750 1863 ntBASIC5.16□□□□□ -1.58
SSR1P43307 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.16□□□□□ -1.58
SSR1P43307 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.16□□□□□ -1.58
SSR1P43307 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.16□□□□□ -1.58
SSR1P43307 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SSR1P43307 RNA5SP513-201ENST00000364648 118 ntBASIC5.16□□□□□ -1.58
SSR1P43307 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SSR1P43307 Z97832.1-201ENST00000402490 328 ntBASIC5.16□□□□□ -1.58
SSR1P43307 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 RNA5SP239-201ENST00000410218 129 ntBASIC5.16□□□□□ -1.58
SSR1P43307 RNU6-603P-201ENST00000411403 107 ntBASIC5.16□□□□□ -1.58
SSR1P43307 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.16□□□□□ -1.58
SSR1P43307 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 KNOP1P3-201ENST00000446933 426 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC016724.1-201ENST00000453215 421 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.16□□□□□ -1.58
SSR1P43307 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.16□□□□□ -1.58
SSR1P43307 IGHV3-32-201ENST00000519182 355 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.16□□□□□ -1.58
SSR1P43307 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.16□□□□□ -1.58
SSR1P43307 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.16□□□□□ -1.58
SSR1P43307 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 AC008536.1-201ENST00000602872 669 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC104687.2-201ENST00000604442 342 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.16□□□□□ -1.58
SSR1P43307 AC097505.1-201ENST00000610199 565 ntBASIC5.16□□□□□ -1.58
SSR1P43307 MIR6826-201ENST00000617808 98 ntBASIC5.16□□□□□ -1.58
SSR1P43307 MIR6729-201ENST00000618194 65 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC000123.2-201ENST00000623124 461 ntBASIC5.16□□□□□ -1.58
SSR1P43307 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.16□□□□□ -1.58
SSR1P43307 AC007529.1-201ENST00000418574 2178 ntBASIC5.16□□□□□ -1.58
SSR1P43307 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSR1P43307 THAP12P4-201ENST00000528321 2266 ntBASIC5.16□□□□□ -1.58
SSR1P43307 A2MP1-204ENST00000566278 4130 ntBASIC5.16□□□□□ -1.58
SSR1P43307 AC022893.2-201ENST00000564832 3296 ntBASIC5.15□□□□□ -1.58
SSR1P43307 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.15□□□□□ -1.58
SSR1P43307 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SSR1P43307 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SSR1P43307 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSR1P43307 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSR1P43307 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.15□□□□□ -1.58
SSR1P43307 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SSR1P43307 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSR1P43307 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSR1P43307 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 AL021331.1-201ENST00000402817 582 ntBASIC5.15□□□□□ -1.59
SSR1P43307 AL078604.1-201ENST00000404609 466 ntBASIC5.15□□□□□ -1.59
SSR1P43307 AL139039.2-201ENST00000407436 479 ntBASIC5.15□□□□□ -1.59
SSR1P43307 EIF4EP1-201ENST00000422311 642 ntBASIC5.15□□□□□ -1.59
SSR1P43307 CNOT7P2-201ENST00000441051 832 ntBASIC5.15□□□□□ -1.59
SSR1P43307 RPS17P2-201ENST00000461663 408 ntBASIC5.15□□□□□ -1.59
SSR1P43307 AC090114.3-201ENST00000479267 829 ntBASIC5.15□□□□□ -1.59
SSR1P43307 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
SSR1P43307 AC004980.4-201ENST00000513375 203 ntBASIC5.15□□□□□ -1.59
SSR1P43307 ENPP7P9-201ENST00000514456 627 ntBASIC5.15□□□□□ -1.59
SSR1P43307 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.15□□□□□ -1.59
SSR1P43307 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 AC087477.6-201ENST00000559595 843 ntBASIC5.15□□□□□ -1.59
SSR1P43307 TVP23CP2-201ENST00000571473 623 ntBASIC5.15□□□□□ -1.59
SSR1P43307 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.15□□□□□ -1.59
SSR1P43307 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.15□□□□□ -1.59
SSR1P43307 AC026979.4-201ENST00000606555 645 ntBASIC5.15□□□□□ -1.59
SSR1P43307 AC015813.4-201ENST00000610469 179 ntBASIC5.15□□□□□ -1.59
SSR1P43307 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSR1P43307 EIF3FP1-201ENST00000613970 806 ntBASIC5.15□□□□□ -1.59
SSR1P43307 uc_338.18-201ENST00000615451 175 ntBASIC5.15□□□□□ -1.59
SSR1P43307 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.15□□□□□ -1.59
SSR1P43307 AC243960.7-201ENST00000623532 707 ntBASIC5.15□□□□□ -1.59
SSR1P43307 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.15□□□□□ -1.59
SSR1P43307 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSR1P43307 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
SSR1P43307 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SSR1P43307 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms