Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGCLP35914 DDX18P3-201ENST00000404856 2007 ntBASIC4.73□□□□□ -1.65
HMGCLP35914 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HMGCLP35914 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCLP35914 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HMGCLP35914 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
HMGCLP35914 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
HMGCLP35914 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HMGCLP35914 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HMGCLP35914 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HMGCLP35914 RNU1-82P-201ENST00000390851 165 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AL589994.1-201ENST00000404962 340 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.72□□□□□ -1.65
HMGCLP35914 AC106901.1-201ENST00000425086 698 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 HMGB3P9-201ENST00000441799 583 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 RAD1P2-201ENST00000446414 663 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC079168.2-201ENST00000453977 416 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.72□□□□□ -1.65
HMGCLP35914 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.72□□□□□ -1.65
HMGCLP35914 AC083982.1-201ENST00000485679 344 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC105233.1-201ENST00000498840 781 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.72□□□□□ -1.65
HMGCLP35914 AL110118.1-201ENST00000553543 400 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 MIR4480-201ENST00000582492 71 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC007448.1-201ENST00000582714 234 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 MIR8069-1-201ENST00000616627 86 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 MIR8069-2-201ENST00000621412 86 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 MIR6730-201ENST00000622213 67 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC091953.3-201ENST00000623220 236 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
HMGCLP35914 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.72□□□□□ -1.65
HMGCLP35914 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 AC107027.3-201ENST00000565095 3473 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 AC126323.6-202ENST00000568092 3511 ntBASIC4.72□□□□□ -1.65
HMGCLP35914 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGCLP35914 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
HMGCLP35914 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.71□□□□□ -1.65
HMGCLP35914 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HMGCLP35914 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.71□□□□□ -1.65
HMGCLP35914 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 OR51H2P-202ENST00000641424 3046 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGCLP35914 RN7SKP267-201ENST00000410381 285 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 AL360081.1-201ENST00000428299 555 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 USP9YP9-201ENST00000429406 715 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCLP35914 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 MTND6P18-201ENST00000439477 513 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCLP35914 H2AFZP5-201ENST00000446960 382 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AC090142.1-201ENST00000465776 462 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGCLP35914 OR7H2P-201ENST00000513483 306 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGCLP35914 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 AC098935.2-201ENST00000604222 466 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 MIR6853-201ENST00000619642 74 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGCLP35914 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCLP35914 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGCLP35914 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGCLP35914 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGCLP35914 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCLP35914 AL031119.1-201ENST00000404707 1879 ntBASIC4.71□□□□□ -1.66
HMGCLP35914 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HMGCLP35914 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms