Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 Z74021.1-201ENST00000423610 407 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 RPL7P2-201ENST00000427639 268 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 ARL4AP4-201ENST00000434170 518 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 PRSS3P4-201ENST00000453323 162 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A5P29400 NPM1P21-201ENST00000513394 762 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 AC099522.1-202ENST00000514718 367 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 SCARNA13-201ENST00000516672 275 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.28□□□□□ -1.56
COL4A5P29400 TVP23BP1-201ENST00000557500 617 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A5P29400 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A5P29400 AC130352.1-201ENST00000602979 661 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 MIR7151-201ENST00000617477 60 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
COL4A5P29400 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A5P29400 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.27□□□□□ -1.57
COL4A5P29400 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A5P29400 AC027228.2-201ENST00000567141 2154 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL4A5P29400 Y_RNA.333-201ENST00000365274 102 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.27□□□□□ -1.57
COL4A5P29400 RPL6P29-201ENST00000414863 865 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 AC018644.1-201ENST00000429934 551 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 AC004938.1-201ENST00000438468 308 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 AL500522.2-201ENST00000448562 343 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A5P29400 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 SUMO2P19-201ENST00000518920 295 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 OR5BC1P-201ENST00000529327 739 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A5P29400 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A5P29400 RN7SL339P-201ENST00000580597 296 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 ADAD1P2-201ENST00000588476 646 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A5P29400 FAM27D1-201ENST00000612308 341 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 AC008013.2-202ENST00000637965 364 ntBASIC5.27□□□□□ -1.57
COL4A5P29400 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL4A5P29400 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A5P29400 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A5P29400 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A5P29400 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A5P29400 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL4A5P29400 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.26□□□□□ -1.57
COL4A5P29400 PTMAP2-201ENST00000397627 327 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A5P29400 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A5P29400 AL354766.1-201ENST00000423396 542 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 HMGB3P5-201ENST00000428894 612 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A5P29400 AC007389.2-201ENST00000434630 306 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 RPL23AP83-201ENST00000434984 473 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.26□□□□□ -1.57
COL4A5P29400 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.26□□□□□ -1.57
COL4A5P29400 DYNLL1P4-201ENST00000549314 266 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A5P29400 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.26□□□□□ -1.57
COL4A5P29400 AC092451.3-201ENST00000625067 1343 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL4A5P29400 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL4A5P29400 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A5P29400 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL4A5P29400 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL4A5P29400 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A5P29400 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A5P29400 AL133243.3-201ENST00000617415 3004 ntBASIC5.26□□□□□ -1.57
COL4A5P29400 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
COL4A5P29400 AL603750.1-201ENST00000624216 1717 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL4A5P29400 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL4A5P29400 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 AL035696.2-201ENST00000407941 709 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 RNU6ATAC-201ENST00000408749 126 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 AC007738.1-201ENST00000413892 348 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A5P29400 AL049874.2-201ENST00000492636 288 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A5P29400 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.25□□□□□ -1.57
COL4A5P29400 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
COL4A5P29400 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A5P29400 AL121772.2-201ENST00000614331 297 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms