Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PDGFRAP16234 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PDGFRAP16234 AL357515.1-201ENST00000402967 542 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 AP002530.1-201ENST00000405705 684 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 OR2AM1P-201ENST00000422137 422 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 AC092162.1-201ENST00000432828 434 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 CYCSP11-201ENST00000436426 315 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 MTCO3P43-201ENST00000440974 771 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 GTF3AP5-201ENST00000442645 697 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFRAP16234 SBDSP1-204ENST00000453858 737 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 AC089999.1-201ENST00000460336 374 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 RN7SL591P-201ENST00000496150 292 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC087272.1-201ENST00000523624 533 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 OR8A2P-201ENST00000528631 952 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AL049830.4-201ENST00000555149 351 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC008536.1-201ENST00000602872 669 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 MTCO3P22-201ENST00000603219 784 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 AC242628.1-201ENST00000606810 391 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 CR589904.2-201ENST00000612533 440 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 AC093591.2-201ENST00000565254 3843 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFRAP16234 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFRAP16234 MTND4P21-201ENST00000453886 1357 ntBASIC5.15□□□□□ -1.59
PDGFRAP16234 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFRAP16234 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 TCP1P3-201ENST00000414406 1498 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 IRF5P1-201ENST00000504852 2164 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFRAP16234 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFRAP16234 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
PDGFRAP16234 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFRAP16234 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFRAP16234 MIR937-201ENST00000401271 86 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 Z86062.1-201ENST00000406773 777 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFRAP16234 PRPF38AP2-201ENST00000438179 851 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 CACYBPP1-201ENST00000438592 684 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 MTND6P18-201ENST00000439477 513 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 MTCYBP12-201ENST00000440559 1134 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 PSMC1P13-201ENST00000458195 985 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 AC092691.2-201ENST00000461787 803 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFRAP16234 AC021205.1-201ENST00000468797 348 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 SUMO1P1-201ENST00000497904 306 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFRAP16234 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.14□□□□□ -1.59
PDGFRAP16234 BTF3P13-201ENST00000513224 490 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 Y_RNA.719-201ENST00000517156 106 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 HMGB1P46-201ENST00000520062 610 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFRAP16234 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.14□□□□□ -1.59
PDGFRAP16234 NPM1P35-201ENST00000533043 868 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFRAP16234 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.14□□□□□ -1.59
PDGFRAP16234 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFRAP16234 MIR3934-201ENST00000579806 107 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 AC011487.3-201ENST00000593607 453 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.14□□□□□ -1.59
PDGFRAP16234 BNIP3P32-201ENST00000600015 554 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 AL008729.2-201ENST00000606393 473 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 AC112694.2-201ENST00000623697 768 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 HPVC1-201ENST00000629899 1198 ntBASIC5.14□□□□□ -1.59
PDGFRAP16234 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFRAP16234 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFRAP16234 AL731532.2-201ENST00000623542 1953 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms