Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.1□□□□□ -1.59
PCNAP12004 AL158211.1-201ENST00000566763 763 ntBASIC5.1□□□□□ -1.59
PCNAP12004 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.1□□□□□ -1.59
PCNAP12004 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCNAP12004 RN7SL622P-201ENST00000585292 275 ntBASIC5.1□□□□□ -1.59
PCNAP12004 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.1□□□□□ -1.59
PCNAP12004 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.1□□□□□ -1.59
PCNAP12004 SCARNA15-201ENST00000607520 4325 ntBASIC5.1□□□□□ -1.59
PCNAP12004 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.1□□□□□ -1.59
PCNAP12004 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.1□□□□□ -1.59
PCNAP12004 AC074101.1-201ENST00000637861 241 ntBASIC5.1□□□□□ -1.59
PCNAP12004 CASC19-204ENST00000641001 2055 ntBASIC5.1□□□□□ -1.59
PCNAP12004 SAMMSON-209ENST00000641222 1100 ntBASIC5.1□□□□□ -1.59
PCNAP12004 OR55B1P-203ENST00000641518 2602 ntBASIC5.1□□□□□ -1.59
PCNAP12004 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCNAP12004 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCNAP12004 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.1□□□□□ -1.59
PCNAP12004 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.1□□□□□ -1.59
PCNAP12004 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCNAP12004 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCNAP12004 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCNAP12004 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.09□□□□□ -1.59
PCNAP12004 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.09□□□□□ -1.59
PCNAP12004 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 ZNF733P-202ENST00000444809 1573 ntBASIC5.09□□□□□ -1.59
PCNAP12004 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PCNAP12004 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCNAP12004 RNU5B-4P-201ENST00000363508 111 ntBASIC5.09□□□□□ -1.59
PCNAP12004 MIR142-201ENST00000384835 87 ntBASIC5.09□□□□□ -1.59
PCNAP12004 RNU1-149P-201ENST00000390870 161 ntBASIC5.09□□□□□ -1.59
PCNAP12004 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 RPL21P67-201ENST00000402896 478 ntBASIC5.09□□□□□ -1.59
PCNAP12004 RPL5P19-201ENST00000404228 893 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AL512430.2-201ENST00000406786 339 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AC114973.1-201ENST00000429057 632 ntBASIC5.09□□□□□ -1.59
PCNAP12004 HSPD1P12-201ENST00000429127 1069 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.09□□□□□ -1.59
PCNAP12004 RPL34P6-201ENST00000432390 345 ntBASIC5.09□□□□□ -1.59
PCNAP12004 CYCSP12-201ENST00000437729 300 ntBASIC5.09□□□□□ -1.59
PCNAP12004 MTND6P18-201ENST00000439477 513 ntBASIC5.09□□□□□ -1.59
PCNAP12004 RPL6P5-201ENST00000445678 828 ntBASIC5.09□□□□□ -1.59
PCNAP12004 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 RPS17P11-201ENST00000474297 293 ntBASIC5.09□□□□□ -1.59
PCNAP12004 RN7SL184P-201ENST00000488308 297 ntBASIC5.09□□□□□ -1.59
PCNAP12004 UBE2V1P12-201ENST00000503954 474 ntBASIC5.09□□□□□ -1.59
PCNAP12004 RNA5SP362-201ENST00000516048 118 ntBASIC5.09□□□□□ -1.59
PCNAP12004 SNORA19.3-201ENST00000516165 130 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.09□□□□□ -1.59
PCNAP12004 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 AL049870.4-201ENST00000555741 486 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 RPL10P14-201ENST00000565265 298 ntBASIC5.09□□□□□ -1.59
PCNAP12004 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.09□□□□□ -1.59
PCNAP12004 AC099785.1-201ENST00000605697 437 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AC090506.2-201ENST00000624521 419 ntBASIC5.09□□□□□ -1.59
PCNAP12004 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PCNAP12004 AC114947.2-201ENST00000565748 2125 ntBASIC5.09□□□□□ -1.59
PCNAP12004 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.6
PCNAP12004 AC023421.1-201ENST00000590535 1785 ntBASIC5.09□□□□□ -1.6
PCNAP12004 AP000542.2-201ENST00000623199 6179 ntBASIC5.09□□□□□ -1.6
PCNAP12004 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.09□□□□□ -1.6
PCNAP12004 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCNAP12004 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.08□□□□□ -1.6
PCNAP12004 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.08□□□□□ -1.6
PCNAP12004 HSPA8P18-201ENST00000439846 1928 ntBASIC5.08□□□□□ -1.6
PCNAP12004 RNA5SP223-201ENST00000365174 120 ntBASIC5.08□□□□□ -1.6
PCNAP12004 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCNAP12004 SNORA48.4-201ENST00000391089 134 ntBASIC5.08□□□□□ -1.6
PCNAP12004 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.08□□□□□ -1.6
PCNAP12004 RNU6-584P-201ENST00000410350 95 ntBASIC5.08□□□□□ -1.6
PCNAP12004 RN7SKP59-201ENST00000410520 314 ntBASIC5.08□□□□□ -1.6
PCNAP12004 COX5BP7-201ENST00000414780 274 ntBASIC5.08□□□□□ -1.6
PCNAP12004 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.08□□□□□ -1.6
PCNAP12004 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.08□□□□□ -1.6
PCNAP12004 AC009302.1-201ENST00000417147 390 ntBASIC5.08□□□□□ -1.6
PCNAP12004 AC073136.2-201ENST00000417282 849 ntBASIC5.08□□□□□ -1.6
PCNAP12004 LINC01347-201ENST00000417964 355 ntBASIC5.08□□□□□ -1.6
PCNAP12004 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.08□□□□□ -1.6
PCNAP12004 MTCO2P17-201ENST00000424336 677 ntBASIC5.08□□□□□ -1.6
PCNAP12004 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.08□□□□□ -1.6
PCNAP12004 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.08□□□□□ -1.6
PCNAP12004 DPY19L1P2-201ENST00000426647 915 ntBASIC5.08□□□□□ -1.6
PCNAP12004 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.08□□□□□ -1.6
PCNAP12004 RPS7P2-201ENST00000435134 607 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms