Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU4-89P-201ENST00000607443 133 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 AC008013.2-202ENST00000637965 364 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
TOP2AP11388 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.7□□□□□ -1.18
TOP2AP11388 AC109446.4-201ENST00000623235 2755 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.7□□□□□ -1.18
TOP2AP11388 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
TOP2AP11388 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.69□□□□□ -1.18
TOP2AP11388 AL603750.1-201ENST00000624216 1717 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
TOP2AP11388 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TOP2AP11388 AL035696.2-201ENST00000407941 709 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.69□□□□□ -1.18
TOP2AP11388 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.69□□□□□ -1.18
TOP2AP11388 RPL5P32-201ENST00000454085 879 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 snoU13.22-201ENST00000459428 104 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 RNA5SP446-201ENST00000515955 82 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC7.69□□□□□ -1.18
TOP2AP11388 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.69□□□□□ -1.18
TOP2AP11388 AP001153.1-201ENST00000641024 338 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TOP2AP11388 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
TOP2AP11388 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TOP2AP11388 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TOP2AP11388 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TOP2AP11388 AC140134.1-201ENST00000511830 3544 ntBASIC7.69□□□□□ -1.18
TOP2AP11388 RNU6-628P-201ENST00000410675 107 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.68□□□□□ -1.18
TOP2AP11388 AC053481.3-201ENST00000577881 843 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC7.68□□□□□ -1.18
TOP2AP11388 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
TOP2AP11388 AC017104.4-201ENST00000636283 1592 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC7.68□□□□□ -1.18
TOP2AP11388 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC7.68□□□□□ -1.18
TOP2AP11388 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.68□□□□□ -1.18
TOP2AP11388 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 AL080315.1-201ENST00000406055 466 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.68□□□□□ -1.18
TOP2AP11388 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.68□□□□□ -1.18
TOP2AP11388 CYP4F29P-201ENST00000420685 446 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.68□□□□□ -1.18
TOP2AP11388 MRPL48P1-201ENST00000445390 636 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC7.68□□□□□ -1.18
TOP2AP11388 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TOP2AP11388 NDUFB4P12-201ENST00000513465 390 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
TOP2AP11388 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
TOP2AP11388 NPM1P5-201ENST00000557228 838 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 AC005034.4-201ENST00000603612 899 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 FP325313.1-201ENST00000638228 703 ntBASIC7.68□□□□□ -1.18
TOP2AP11388 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TOP2AP11388 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TOP2AP11388 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TOP2AP11388 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TOP2AP11388 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
TOP2AP11388 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TOP2AP11388 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.67□□□□□ -1.18
TOP2AP11388 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC7.67□□□□□ -1.18
TOP2AP11388 NMNAT1P2-201ENST00000435192 860 ntBASIC7.67□□□□□ -1.18
TOP2AP11388 RN7SL812P-201ENST00000493791 279 ntBASIC7.67□□□□□ -1.18
TOP2AP11388 OR5BC1P-201ENST00000529327 739 ntBASIC7.67□□□□□ -1.18
TOP2AP11388 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TOP2AP11388 DYNLL1P4-201ENST00000549314 266 ntBASIC7.67□□□□□ -1.18
TOP2AP11388 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.67□□□□□ -1.18
TOP2AP11388 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.67□□□□□ -1.18
TOP2AP11388 AC025175.1-201ENST00000606482 759 ntBASIC7.67□□□□□ -1.18
TOP2AP11388 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.67□□□□□ -1.18
TOP2AP11388 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TOP2AP11388 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TOP2AP11388 RNA5SP307-201ENST00000362863 116 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 SNORA70.4-201ENST00000365509 134 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 MIR554-201ENST00000384874 96 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 MT-RNR1-201ENST00000389680 954 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.66□□□□□ -1.18
TOP2AP11388 RNA5SP36-201ENST00000410197 133 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 TPT1P2-201ENST00000413105 503 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.66□□□□□ -1.18
TOP2AP11388 AL133372.1-201ENST00000493565 745 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 RNA5SP360-201ENST00000516555 118 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.66□□□□□ -1.18
TOP2AP11388 RPL23AP97-201ENST00000568955 471 ntBASIC7.66□□□□□ -1.18
TOP2AP11388 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.66□□□□□ -1.18
TOP2AP11388 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms